KEGG   Micromonas pusilla: MICPUCDRAFT_49651
Entry
MICPUCDRAFT_49651 CDS       T02696                                 
Name
(RefSeq) NURF complex component
  KO
K10752  histone-binding protein RBBP4
Organism
mpp  Micromonas pusilla
Pathway
mpp03082  ATP-dependent chromatin remodeling
mpp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MICPUCDRAFT_49651
   03083 Polycomb repressive complex
    MICPUCDRAFT_49651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpp03036]
    MICPUCDRAFT_49651
Chromosome and associated proteins [BR:mpp03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     MICPUCDRAFT_49651
  Histone modification proteins
   HAT complexes
    HATB complex
     MICPUCDRAFT_49651
   HDAC complexes
    Sin3A-HDAC complex
     MICPUCDRAFT_49651
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     MICPUCDRAFT_49651
    PRC2.2
     MICPUCDRAFT_49651
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     MICPUCDRAFT_49651
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    MICPUCDRAFT_49651
  Chromatin remodeling factors
   NuRD complex
    MICPUCDRAFT_49651
   NuRF complex
    MICPUCDRAFT_49651
   NuRF complex (fruit fly)
    MICPUCDRAFT_49651
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd Beta-prop_CAF1B_HIR1 WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_EML WD_LRWD1 WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 eIF2A MIOS_WD40 Beta-prop_SPT8 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 9685844
NCBI-ProteinID: XP_003060701
JGI: 49651
UniProt: C1MXJ1
LinkDB
Position
Unknown
AA seq 425 aa
MGKEDDEFPDELEERLVSEEYKIWKKNTPFLYDLVVTHALEWPSLTVQWLPDRVEPSGKD
YSVQKLILGTHTSENEQNYLMIAEVQLPLEDAEIDSRQENERGEVGGFGSAAGKVQVTQL
INHDGEVNRARYCPHNPFLLATKTVSADVYLFDYAKHPSKPPAEGGCAPDLRLRGHKTEG
YGLSWSPFKEGRLLSGSDDAQICLWDVQGPLGEGAKTVDALQIYQGHLGVVEDVAWHSTH
EHMFGSVGDDKQLLLWDTRKPAKEATLQSVNAHDAEVNCLAFNPFNEYVLATGSADQTVA
IFDIRNLSNRLHTFSNHTEEVFQIGWSPKNETYLASCGADRRLMVWDLSRIGDEQTPEDA
EDGPPELMFIHGGHTSKISDFAWNGNDDMVVASVAEDNILQIWQMAENIYLDDKGLDLDK
DDGKK
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgggcaaggaagacgatgagttccccgacgagctcgaggagaggctcgtctccgaggag
tacaagatatggaagaagaacacgccgttcttgtacgatctcgtcgtcacgcacgcgctg
gagtggccgtcgctcaccgtgcagtggcttcccgatcgcgtcgagccgagcgggaaggac
tacagcgtccagaagctcatcctggggacgcacacgagcgagaacgagcagaactatctc
atgatcgcggaagtgcagctccctctcgaggacgcggagatcgacagccgccaggagaac
gagagaggcgaggtgggcggcttcggaagcgccgcgggaaaggtccaagtcacgcagctc
ataaaccacgacggcgaggtgaaccgcgcgaggtactgcccgcataacccgttccttctc
gcgacgaagaccgtctccgcggacgtgtacttgttcgattacgcgaagcacccgtcgaaa
cctcccgcggagggcgggtgcgcgcccgatctccgcctgagagggcacaagaccgagggg
tacggcttatcgtggtcgccgttcaaagaagggcgtctgctctccggcagcgacgacgcg
cagatctgcctctgggacgttcaaggcccgctcggggagggcgcgaagacggtcgacgcg
ctgcaaatctaccaagggcacctcggcgtcgtcgaggacgtcgcgtggcactccacgcac
gagcacatgttcggaagcgtcggcgacgacaagcagcttttgctgtgggacacgcggaag
ccggcgaaggaggcgacgctgcagagcgtcaacgcgcacgacgcggaggtgaactgcctc
gcgtttaacccgttcaacgagtacgtcctcgcgaccgggagcgcggaccagacggtcgcg
atcttcgacattcggaacttgtcgaaccgtctgcacacgttttcgaaccacaccgaggag
gtgttccagatcggatggtcgccgaagaacgaaacgtacctcgcgtcgtgcggcgcggac
aggaggctcatggtgtgggatctgagcaggatcggggacgagcagaccccggaggacgcg
gaggacggcccgccggagctgatgttcatccacggcgggcacaccagcaagatctccgat
ttcgcgtggaacggaaacgacgacatggtcgtcgcgtccgtcgcggaggataacatcctg
cagatctggcagatggcggagaacatctacctggacgataaagggctcgacctggacaag
gacgacgggaagaagtga

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