Micromonas pusilla: MICPUCDRAFT_51326
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Entry
MICPUCDRAFT_51326 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mpp
Micromonas pusilla
Pathway
mpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUCDRAFT_51326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_51326
Enzymes [BR:
mpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MICPUCDRAFT_51326
Spliceosome [BR:
mpp03041
]
Complex C
Other components
Step II factors
MICPUCDRAFT_51326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
ABC_tran
nSTAND3
AAA_19
AAA_16
SRP54
AAA_30
ResIII
AAA
Cas3-like_C_2
AAA_24
T2SSE
TsaE
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
9687218
NCBI-ProteinID:
XP_003061534
JGI:
51326
UniProt:
C1N1A6
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MDDETRARRRRELLEGRKRLPMYATRERLLRELEENETLIVVGETGSGKTTQIPQFAHEA
NLASGRVVACTQPRRVAAISVARRVAEETGTELGDLVGYAIRFEDVSSAATRIKFLTDGM
LLRECMVDAELNKYGVVMIDEAHERTLQTDFLLGTIRGVQERRRGTDAPLKIVVMSATLE
ASSFSSFFHDAPVVYGRGRTFPVETFYVEEPEDDYLDAAMCAVCQINEDEEEGDVLVFLT
GQEEIESLGRLLRARSKLANAASGVRRLHVVLLFAALPPEEQMRVFEPTPPGSRKIVLAT
NIAETSLTINGIKYVVDCGLTKQRIYHPRSGVDELVVSPVAVSQAMQRAGRAGREGPGKC
FRLYCESVLNSLEPHVKPELLRTNLGGVVLQLKAMGVDDVLSFPFIDAPPKEALVRSLEL
LFALGALGKDGKLTSVGKKMSRFPLEPMAAKAIIAAANEGCGEDTVAVLSMLTTDSVFKQ
HERGAGGVREKNTAREQHARKEGDHVTFLEVFRAFQGCSPKRRKEWASSNGVHLRSMLKA
LDIFKQLSRAAEGEGVEMKSAGSATAPLLRSLVSGYFLNTARKQADGSYKTMSTGQRLVI
HPSSILFHSAPEMILFNELVKTNRLYARDVSSIQPEWLAELSPNVFSIRKE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagacgcgagcgcgacggaggcgcgagctcctcgagggacggaagcggctg
ccgatgtacgccacgcgagagcgcctgcttcgcgagctcgaggagaacgagacgctgatc
gtcgtcggcgagaccggaagcgggaagacgacgcagataccgcagttcgcgcacgaggcg
aacctcgcgagcgggcgcgtcgtcgcgtgcacgcaaccgcgtcgcgtcgcggcgatatcc
gtcgcgcgtcgcgtcgcggaggagaccggcacggagctcggcgacctcgtcgggtacgcg
atccgcttcgaggacgtctcgagcgcggcgacgcggatcaagttcctcacggacgggatg
ctcctgcgcgagtgcatggtggacgcggagttgaacaagtacggcgtcgtgatgatcgac
gaggcgcacgagcgcacgctgcagacggacttcctgttgggcacgatacgaggcgtgcaa
gagcgtcgccgcggcaccgacgcgccgctgaagatcgtcgtcatgtccgcgacgttggag
gcgtcgtcgttctcgagcttcttccacgacgcgcccgtcgtgtacggcagaggacggacg
ttccccgtggagacgttttacgtcgaggagccggaggacgattacctcgatgccgcaatg
tgcgcggtgtgtcagatcaacgaggacgaagaggaaggggacgtcctcgtgttcttgacc
gggcaggaggagatcgaatccttggggaggctcctcagagcgcgctcgaagctcgcgaac
gcggcgagcggcgtcaggagattacacgtcgtcttgttgttcgccgcgctgccgccggag
gagcagatgcgggtgttcgaaccgacgccgccggggtcgaggaagatcgtcctcgcgacg
aacatcgcggagacgtcgctgacgatcaacgggatcaagtacgtcgtcgactgcgggctg
acgaagcagcggatataccacccgaggagcggcgtggacgagctcgtcgtctcgcccgtc
gcggtgtcgcaagcgatgcaacgcgccggtcgcgccgggcgcgagggcccggggaagtgt
tttcggctgtactgcgagtccgtgttgaactctctggagccgcacgtcaagccggagctt
ctgaggacgaacctcggcggcgtcgttttgcagctgaaggcgatgggggtcgacgacgtc
ttgtcgtttccgttcatcgacgcgccgccgaaagaggcgctcgtgcgctcgttagagctc
ttgttcgccctcggcgcgctcgggaaggacggaaagctcacctcggtcgggaagaagatg
tcgcggttcccgctcgaaccgatggccgcgaaagcgatcatcgccgccgcgaacgaaggc
tgcggcgaggacaccgtcgccgtgctctcgatgctcacgacggacagcgtgttcaagcag
cacgagagaggcgcggggggcgtccgggagaagaacaccgcgcgggagcagcacgcgagg
aaggaaggcgaccacgtcacgttcttggaggtgtttcgagcgtttcaagggtgctcgccg
aagcgaaggaaggagtgggcgtcgtccaacggcgtgcacctccggtcgatgctcaaggcg
ctcgacatcttcaagcaactgtcgcgcgcggcggagggggagggcgtggagatgaagtcg
gccgggtccgcgaccgcgccgctgctgcgatcgctcgtgtccggctacttcctgaacacg
gcgaggaaacaggcggacggaagctacaagacgatgtccacggggcagcggctcgtgatt
cacccgtcgtcgattttgtttcactccgcgccggagatgatcctgttcaacgagctcgtg
aaaacgaatcggctgtacgcgcgggacgtgtcgtcgatacagccggagtggctcgcggag
ctctcgccgaacgtgttttcgattaggaaagaatga
DBGET
integrated database retrieval system
