Micromonas pusilla: MICPUCDRAFT_53673
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Entry
MICPUCDRAFT_53673 CDS
T02696
Symbol
RRM
Name
(RefSeq) RNA binding protein
KO
K12881
THO complex subunit 4
Organism
mpp
Micromonas pusilla
Pathway
mpp03013
Nucleocytoplasmic transport
mpp03015
mRNA surveillance pathway
mpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUCDRAFT_53673 (RRM)
09122 Translation
03013 Nucleocytoplasmic transport
MICPUCDRAFT_53673 (RRM)
03015 mRNA surveillance pathway
MICPUCDRAFT_53673 (RRM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_53673 (RRM)
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_53673 (RRM)
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MICPUCDRAFT_53673 (RRM)
TREX complex
MICPUCDRAFT_53673 (RRM)
Spliceosome [BR:
mpp03041
]
Complex C
Other components
EJC/TREX
MICPUCDRAFT_53673 (RRM)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MICPUCDRAFT_53673 (RRM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RBD_DEAH11
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
9689167
NCBI-ProteinID:
XP_003063726
JGI:
53673
UniProt:
C1N7F4
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MDIDQSLDAMIKAAPKKGGPKKKPAAGKKKTPVKKTGGGVRAKVIAKPRRGGQGGRARDV
AMAVDDAWQHDRFQGGNRGPRAGGGGGGARLVVSNLHFNVTNADVKELFQQVGAVKKAGL
NFDENGRSKGTAEIIFASPASAQKAIQTYNGVKLDGRPLKIELIGGGGGLGGSLAGRLSG
VGAGGRTVTFNAGRGGSGVRGGRKVVAKVVSAPRGKKGAAGGAKGAGGRGAKGGGRGGKG
GRGPKPKKATPMTQEQLDAQLDSYKAGAAAAPAGDVAMME
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgatcaaagtttagacgccatgatcaaggctgcgccgaagaagggcgggccg
aagaagaagccggccgccgggaagaagaagaccccggtcaagaagaccggcggcggcgtc
cgcgccaaggtgatcgcgaaaccgcgtcgcggcggccaaggtggtcgcgcgcgcgacgtc
gcgatggccgtcgacgacgcgtggcagcacgaccgcttccaaggcggcaatcgcggaccc
agagcgggcggcggcggcggcggcgcgaggctcgtcgtgtcgaaccttcacttcaacgtc
acgaacgcggacgtcaaggagctgttccagcaagtcggcgcggtgaagaaagccgggctg
aacttcgacgaaaacggccgaagcaagggcaccgcggagatcatcttcgcgtctcccgcg
tcggcgcagaaggcgatccagacgtacaacggcgtcaagctcgacggccgaccgctcaag
atcgagctcatcggcggcggcggcggcctcggcggcagcctcgccgggcgtttgtccggc
gtcggcgccggcggacggacggtgacgttcaacgccggacgcggcggatcaggcgtccgc
ggcggacggaaagtcgtcgccaaagtcgtcagcgcgccgcgtggaaagaagggcgccgcg
ggcggcgctaagggcgccggcggccgcggcgcgaagggcggcggccgcggaggtaagggt
gggcgcgggccgaagccgaagaaggcgacgccgatgacgcaggagcagctcgacgcgcag
ctggactcgtacaaggctggcgccgccgccgcgccagccggcgacgtcgcgatgatggag
tga
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