KEGG   Micromonas pusilla: MICPUCDRAFT_53673
Entry
MICPUCDRAFT_53673 CDS       T02696                                 
Symbol
RRM
Name
(RefSeq) RNA binding protein
  KO
K12881  THO complex subunit 4
Organism
mpp  Micromonas pusilla
Pathway
mpp03013  Nucleocytoplasmic transport
mpp03015  mRNA surveillance pathway
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_53673 (RRM)
  09122 Translation
   03013 Nucleocytoplasmic transport
    MICPUCDRAFT_53673 (RRM)
   03015 mRNA surveillance pathway
    MICPUCDRAFT_53673 (RRM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_53673 (RRM)
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_53673 (RRM)
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     MICPUCDRAFT_53673 (RRM)
    TREX complex
     MICPUCDRAFT_53673 (RRM)
Spliceosome [BR:mpp03041]
 Complex C
  Other components
   EJC/TREX
    MICPUCDRAFT_53673 (RRM)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MICPUCDRAFT_53673 (RRM)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RBD_DEAH11 RRM_occluded RRM_3
Other DBs
NCBI-GeneID: 9689167
NCBI-ProteinID: XP_003063726
JGI: 53673
UniProt: C1N7F4
LinkDB
Position
Unknown
AA seq 280 aa
MDIDQSLDAMIKAAPKKGGPKKKPAAGKKKTPVKKTGGGVRAKVIAKPRRGGQGGRARDV
AMAVDDAWQHDRFQGGNRGPRAGGGGGGARLVVSNLHFNVTNADVKELFQQVGAVKKAGL
NFDENGRSKGTAEIIFASPASAQKAIQTYNGVKLDGRPLKIELIGGGGGLGGSLAGRLSG
VGAGGRTVTFNAGRGGSGVRGGRKVVAKVVSAPRGKKGAAGGAKGAGGRGAKGGGRGGKG
GRGPKPKKATPMTQEQLDAQLDSYKAGAAAAPAGDVAMME
NT seq 843 nt   +upstreamnt  +downstreamnt
atggacatcgatcaaagtttagacgccatgatcaaggctgcgccgaagaagggcgggccg
aagaagaagccggccgccgggaagaagaagaccccggtcaagaagaccggcggcggcgtc
cgcgccaaggtgatcgcgaaaccgcgtcgcggcggccaaggtggtcgcgcgcgcgacgtc
gcgatggccgtcgacgacgcgtggcagcacgaccgcttccaaggcggcaatcgcggaccc
agagcgggcggcggcggcggcggcgcgaggctcgtcgtgtcgaaccttcacttcaacgtc
acgaacgcggacgtcaaggagctgttccagcaagtcggcgcggtgaagaaagccgggctg
aacttcgacgaaaacggccgaagcaagggcaccgcggagatcatcttcgcgtctcccgcg
tcggcgcagaaggcgatccagacgtacaacggcgtcaagctcgacggccgaccgctcaag
atcgagctcatcggcggcggcggcggcctcggcggcagcctcgccgggcgtttgtccggc
gtcggcgccggcggacggacggtgacgttcaacgccggacgcggcggatcaggcgtccgc
ggcggacggaaagtcgtcgccaaagtcgtcagcgcgccgcgtggaaagaagggcgccgcg
ggcggcgctaagggcgccggcggccgcggcgcgaagggcggcggccgcggaggtaagggt
gggcgcgggccgaagccgaagaaggcgacgccgatgacgcaggagcagctcgacgcgcag
ctggactcgtacaaggctggcgccgccgccgcgccagccggcgacgtcgcgatgatggag
tga

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