Micromonas pusilla: MICPUCDRAFT_54013
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Entry
MICPUCDRAFT_54013 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mpp
Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpp03016
]
MICPUCDRAFT_54013
Enzymes [BR:
mpp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MICPUCDRAFT_54013
Transfer RNA biogenesis [BR:
mpp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MICPUCDRAFT_54013
Prokaryotic type
MICPUCDRAFT_54013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
9689677
NCBI-ProteinID:
XP_003064046
JGI:
54013
UniProt:
C1N8A4
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MLAGAFRCASRNARRHARASASAEAFSAEAARFSSSSSPLLHRIPEEVPFRRRLVRWSAV
GARSFASSVASSSSSSSSSPPPPTRSIAYVPRYKRDSRRPNANPRPSAGAGGGEGEGEGS
TPARLTARARRRSAKERAAAVDVPKISRTAPDVVDDDGIDGGGEMGKRRAKKAPGAGYEV
CARDGRVYDARGGELGRKQVGGDAYAQVVALGVDAGEDTSPGVLIFTNRRRYVFNVGEGF
QRFCVEHGVALRKLERVFLTRASARTSGGLTGMLLTVADERGNPVATGAQRSEACDIPEL
TVHGPPRGVTDVPLTRSAALRLRTTNTRRLAAGVVDAILFFLVFFGFSLARSVLLRPPEA
SVADTSVRPSPPPVNCNHTALSFPPAGTPGGPFTRTVALHLRKSYTHEARASDGAFFFSL
RARQTRAFFSHPSPPLPPSPSCAGAFHTLVGTNRNVKVNSRPFELTAPGGPTERHPHAHK
DEQMEVTPVVISLPATTATRGGASGPFGDVASLGRHVAKRQKTMEEGGGDVGGLDDAGDP
GSNGHNQGVTSALVLDETEAEAVCYGLQMAPSAGKFDNAKAEALGIPKGPWCSDLVHGYS
ITLENGTVIEPSMVVGAPTTGARIFIADVPTTRHLAEITREGSPSYNALRKLGHVSDKKV
SDEDLAVSEDTDAAFPIGDLGCVFHLTPSSVANTPEYEAWTRDCEAFINPARTTTKTTTT
RDGVETTTTTTTTTPVRHVFVNALTHADAPTFRASHIVSHRVSAVDDKVFPPRSAKAAWT
QRIAWATDRAKVADDNWVRAAAAAAANNGSGDGAGTTTSSSPPPPPTPIVHPGVNNTKYV
LMPVDKQRVDATDARAPPAMSGSYINYDLAPHALKKIVADAEATRSAAAAKAEAEAEASS
ALELELEPEAKPAEAKPKPPTGAELPTPRALRGLREGDVELSFLGTGSSAPAKYRNVSGI
FLDVPSRGCMFLDAGEGTFGQLNRLYGAAGADARLRRLKMIWISHVHADHHVGVPTLLAE
RRARMIASGIENPPPLVVVGPPALRRYLLAYEQVQPLCYHFVACHEVREDRWAAAAADAR
RFPSLGFYEERSLNLVRAACEEMELARVVSAPVVHCAQSYAVSVEAKPREKELVVESENA
PAEKAADVVPGWKLVYSGDTRPCESLTRLATDATVLVHEATFENDMDEDAIKKRHSTTRD
AVRTGVEARAYRTILTHFSQRYPKIPVLDESVSERTAVAFDMMRVDFARDLPRLPSLVPA
VQAVFLDPEEVFGGGGNNTAAANKKKKWGPPPRGGSKSPPRR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccggggcgttccggtgcgcgtcgaggaacgcgcgaaggcacgcgcgcgcgagc
gcgtccgcggaggcgttctcagcggaggcggctcgcttctcctcctcttcgtcgcccctc
cttcaccgcatccccgaggaggtgccgttccgccgccgcctcgtgcgctggtccgcggtc
ggcgcgcgctccttcgcgtcgtccgtcgcgtcgtcgtcgtcgtcgtcgtcgtcgtcgccg
ccgccgccgacgcggtcgatcgcgtacgtccctcgatacaagcgcgactcgagaagaccg
aacgcgaacccgagaccgagcgcgggcgcgggcggcggcgagggcgagggcgagggatcg
acccccgcgcggctcaccgcgagggcgcggcggcgatcggcgaaggagcgcgcggcggcg
gtggacgtcccgaagatcagcagaaccgcgccggacgtcgtcgacgacgacggcatcgac
ggaggaggcgagatggggaagaggagggcgaagaaggcgccgggagccgggtacgaggtg
tgcgcgcgcgacggccgcgtgtacgacgcgcggggaggggagctgggaaggaagcaggtg
ggcggggacgcgtacgcgcaagtggtggcgctcggcgtggacgcgggcgaggacacgagc
ccgggggtgctcatctttaccaaccgccgacggtacgtcttcaacgtcggcgaggggttt
cagcggttttgcgtcgaacacggcgtcgcgctgcggaaactggaacgcgtgtttctgacg
cgcgcgagcgcgaggacgtccggggggctgaccgggatgctgctgaccgtcgcggacgag
agagggaacccggtcgcgaccggggcgcagaggagcgaggcgtgcgacatcccagagctg
accgtgcacgggccgccgaggggggtcacggacgttcccttaacacggagcgccgccctg
cgtctgaggacaacaaacacgaggaggctcgcggcgggcgtcgtcgacgcaattttattt
tttttggttttttttggtttttccctcgctcgctcggtccttctccgcccgcccgaagcg
tccgtcgccgataccagcgtccgtccgtcgccgccgccggtgaattgcaatcatactgcg
ttatctttcccacccgcggggactcccggcggtccctttacacggaccgtcgccctgcat
ctgaggaaatcatacacacatgaggcgcgagcgagcgacggagcgttttttttttctctt
cgcgcccgccaaacccgagcgtttttttctcatccatccccgcccctccctccctccccc
tcgtgcgcaggcgcgttccacaccctcgtcggcaccaaccgaaacgtcaaagtcaactcg
cgaccgttcgagctcaccgcgcccggcggcccgaccgagcgccacccccacgcgcacaag
gacgagcagatggaggtgacccccgtggtgatttcgcttccggcgacgacggcgacccgg
gggggcgcgtccgggccgttcggcgacgtcgcgtccctcggccgtcacgtcgcgaagcgc
cagaaaacgatggaggagggaggaggagacgtaggaggtttagacgatgcgggtgatcct
ggtagtaacggtcataaccaaggcgttacctccgcgctcgtgctcgacgagaccgaggct
gaggcggtgtgctacgggctccagatggcgccgtcggcggggaagttcgacaacgcgaaa
gcggaggcgctcgggatacccaaagggccctggtgctcggacctcgtccacgggtactcg
atcacgctggagaacggcaccgtgatcgagccgagcatggtcgtcggagcgccgacgacg
ggcgcgcgcattttcatcgccgacgtgccgacgacgcgtcacctcgcggagatcaccagg
gaagggtcgccgtcgtacaacgcgcttcgaaaactcggacatgtgtcggacaagaaagtg
tcggacgaagatctagcggtgtcggaagatacggacgccgcctttccgatcggcgacctc
gggtgcgtgttccacctcaccccgtcgagcgtcgcgaacacgccggagtacgaggcgtgg
acgcgcgactgcgaggcgtttatcaatcccgcgagaacgacgacgaagacgacgacgacg
agagacggcgtcgagacgacgacgacgacgacgacgacgacgccggtgcggcacgtgttc
gtgaacgcgctgacccacgcggacgcgccgacgtttcgcgcgtcgcacatcgtgagccac
cgcgtgagcgcagtggacgacaaggtgttcccgccgcggagcgccaaggcggcgtggacg
cagcggatcgcgtgggcgacggaccgagcgaaagtcgcggacgacaattgggtcagagcc
gccgccgccgccgccgcgaataacgggagcggcgacggcgcggggacgacgacgtcgtcg
tcgccgccgccgccgccgacgccgatcgttcaccccggcgtgaacaacacgaagtacgtc
ttgatgccggtggataaacaacgcgtcgacgcgacggacgcgcgcgcgccgccggcgatg
tcggggagttacatcaactacgacctggcgccgcacgcgttgaagaagatcgtcgcggac
gcggaggcgacgcggtcggccgcggcggcgaaggcggaggcggaggcggaggcgtcgtcg
gcgttggaactggaactggagccggaagcgaaaccggcggaggcgaaaccgaaaccgccc
acgggcgcggagctgccgacgccgcgcgctttgcgagggctccgcgagggcgacgtcgag
ctgtccttcctcggcaccggcagctccgcgcccgccaagtaccgcaacgtcagcgggatc
ttcctcgacgtcccgagccgcgggtgcatgtttctggacgcgggcgaggggacgttcggg
cagctcaaccggctgtacggcgccgccggcgccgacgcgcgattgcgacggctcaagatg
atttggatctcgcacgtgcacgcggatcatcacgtcggcgtgccgacgctgctcgcggag
cgacgcgcgcgcatgatcgcgtccgggatcgagaacccgccgccgctcgtcgtcgtcggc
ccgccggcgcttcggaggtatcttctcgcgtacgagcaagtccagccgttgtgttatcat
ttcgtcgcgtgccacgaggtcagggaagaccgctgggcggcggcggcggcggacgcaaga
cgtttcccaagtctagggttctacgaggagcggagtttgaatctcgtgcgcgcggcgtgc
gaggagatggaactcgcgcgcgtcgtctccgcgcccgtcgtgcactgcgcgcagtcgtac
gcggtgtccgtggaggcgaagccgcgggaaaaagaattagtagtagagagcgaaaacgcc
cccgccgaaaaggctgccgacgtcgtccccgggtggaaactcgtctacagcggcgacacg
cgtccgtgcgagtcgctcacgcgcttggcgacggacgccacggtcctcgtccacgaggcg
accttcgagaacgacatggacgaggacgcgataaagaagcggcacagcaccactcgcgac
gcggtgcgaaccggcgtggaggcgcgcgcgtatcgaacgattctgacgcacttctcgcag
cggtatccgaagatcccggtgctggacgagagcgtgagcgagcggaccgcggtcgcgttc
gacatgatgcgcgtggacttcgcgcgcgatctgccgcgattgccgagcctcgtgcccgcg
gtgcaggcggtgttcctcgacccggaggaggtgttcggaggcggcggcaataataccgcc
gccgcgaataagaagaagaagtgggggccgccgccgcggggggggtcgaagtctccgccg
aggcgatga
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