Micromonas pusilla: MICPUCDRAFT_56715
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Entry
MICPUCDRAFT_56715 CDS
T02696
Name
(RefSeq) ran-binding dexh-box helicase
KO
K10841
DNA excision repair protein ERCC-6
Organism
mpp
Micromonas pusilla
Pathway
mpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MICPUCDRAFT_56715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpp03036
]
MICPUCDRAFT_56715
03400 DNA repair and recombination proteins [BR:
mpp03400
]
MICPUCDRAFT_56715
Chromosome and associated proteins [BR:
mpp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
MICPUCDRAFT_56715
DNA repair and recombination proteins [BR:
mpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
MICPUCDRAFT_56715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_RanBP
ResIII
AAA_34
HDA2-3
Motif
Other DBs
NCBI-GeneID:
9682449
NCBI-ProteinID:
XP_003057492
JGI:
56715
UniProt:
C1MMZ1
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
METDELLRGLGVTARGERDVAREVIEDAAARAAEAEATARAKKRCDDDERDDDLPAASAN
ATTTDDGGEGEGQRGGDGPALREVSRLRTEADGVARELLAVRDALDEIRASERDGTAPSD
AALVVAVGNRRVTSLEEKRAELAVAVAAAEASAAEEASAAAAAAAAAAERRGRGTDATAA
SGSGSKTKKKKKKPNAAAALVEDGDLDALLDAEEGGGDGGRLGETERERLIRTGVITPFA
AVDGFERRVKVQQTTDAAAGAVAAWKAGRSKSKLLTGDAVPKQYPAARPFNASNRQGAGG
GEGAKEAARRMASKRREWRRNMNGEGGEAPKRRRKRRQRDAAYSSDEDVEIIEDEVEEED
DEEEEDGVEAPREVEMAPPENGAADAKEEEKDAAVVAGGGGGGGKWSCPGCTFANSTRAR
RCEMCETPKPVVPKREPADDDDDDVVFVGEVAAAEGGARERARGKREKPATATATATATA
TRASPRAKPKPAPRPSTAPPPPRRAAETARARARGTAAAEADDISGTDTGESDWDGDGSD
DADGGSDDDDDDVEPESPEDLEEIAPPARGRGRGRRRASDAAAAAPRGRRRAAAAAAARQ
NRRREANRPAREEEEEEDEEEEEEEEEVIFDGGLRLPAETYDRLLEHQKTSIKWLWEIHC
QRAGGVVGDEMGLGKTVQVAAFLCALERSGLYQPTLIVCPATMLRQWRRELRAWAPKLNC
GILHESAVSAASRAAARGSKKQARCNIIRERVRDPKGVLLTTYEHLRVMRDHLLPVRWGY
AILDEGHKIRNPDADVTICAKQLQTVHRLVMTGAPIQNRLAELWSLFDFCFPGKLGTLPV
FQAQFAVPIQVGGYSNASQQQVTTAYRCASMLKELISPYLLRRMKADVDIQLPTKTEQVL
FCPMTQEQREAYRAYVHSRDVEEILEGRREALGGIDVLRKIVNHPDLLERRTKAAHEKYG
EVERSGKQLVTQKVLELWKEQGHRVLLFSQTQQMLDILEAMVAKAGYPYRRMDGATPVSQ
RMTLIDEFNTDANVFVFLLTTKVGGLGVNLTGADRVLLYDPDWNPSTDAQARERAWRIGQ
TREVTVYRLVTAGTIEEKVYHRQIYKEFLTSKVLKDPKQRRFFKAKDLADLFTWEEDNHG
QGVGGDGQIETAELFAEVEGEIRAADVAEAEDDEAEDEDEDDGGVGGLTAKDIDGASPES
ADDTAWDIDADPAAAAAAARKAAKSKPGGKRFTIATDRSAGARAAQTGGDGDAAIMRSLF
GGGGGGGGTGAEGAAGEPSTGAGLIRGAMSHDAIMRAPNGRDHLVGGGGSAALEADRVAR
RAEEALRQSRVARGSAGVAVPTWTGRSGAAGAPVGAVSAASARRFGRSVPGVGVGGGGGR
FGSGGGGGGGAGIAGIGQGAMGSQTLLQRIRQRDAAAGEAAAAAAAGADFDEGDDDAEAE
TLLREIVDFLRARPSGRAPTGLVVDAFQHRVSSRRTQMFRRLLKTAAALERNPPDANGRG
GGATWCLKDEFKDA
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggagacggacgagctcctccgcgggctgggagtcaccgcgcgaggcgagcgcgacgtc
gcgagggaggtcatcgaggacgccgccgcgcgcgcggcggaggcggaggcgacggcgcgc
gcgaaaaaacgatgtgatgatgatgaacgcgacgacgatctccccgcggcgtcggcgaac
gcgacgacgaccgacgacggaggcgaaggcgagggccagcgcggcggcgacggccccgcg
ctccgcgaggtctcgaggctgcggaccgaggcggacggcgtcgcgcgagagctcctcgcg
gtgcgagacgcgctcgacgagatccgcgcgagcgagcgcgacgggaccgcgccgtccgac
gcagcgctcgtcgtcgccgtcgggaaccgacgcgtgacgtctctggaggagaaacgagcc
gagctcgcggtcgcggtcgcggccgcggaggcgtccgccgcggaggaggcgtccgccgcc
gccgccgccgccgccgccgccgccgagcgtcgcggacgcgggacggacgcgaccgccgcg
tcggggtcgggatcgaagacgaagaagaagaaaaaaaagccgaacgccgccgcggcgctc
gtcgaggacggcgacttggacgccctcctcgacgccgaggagggcggcggcgacggtggg
cgcctcggggagaccgagcgcgagcggctgatacgcaccggggtgatcaccccgttcgcg
gccgtggacgggttcgagcgaagggtcaaggtgcagcagacgacggacgccgccgccggg
gctgtagcggcctggaaagcgggaaggagcaagtcgaaactcctcaccggcgacgcggtc
ccgaagcagtacccggcggcgaggccgttcaacgcgtcgaaccgacaaggcgccggcggc
ggcgagggcgcgaaagaggctgcgaggcggatggcctcgaagcgacgggagtggcggcgg
aacatgaacggcgagggcggggaggcgccgaagcggcgacggaagcggcggcagcgggac
gcggcgtacagcagcgacgaggacgtggagatcatagaggacgaagtagaagaagaagat
gacgaagaagaagaagacggcgttgaggcgccgcgagaggtcgagatggcgccgccggag
aacggtgccgcggacgcgaaggaagaggaaaaggacgccgccgtcgtcgccggcggcggc
ggcggcggagggaagtggtcctgccccgggtgcacgttcgcgaattcgacgcgcgcgcgg
cggtgcgagatgtgcgagaccccgaagccggtcgttccgaagcgcgaaccggcggacgac
gacgacgacgacgtcgtgttcgtgggggaggtcgccgcggctgagggcggtgcgcgagag
cgagcgcgcgggaagagggagaaaccggcgacggcgacggcgacggcgacggcgacggcg
acgcgcgcgagtccgcgcgcgaagcctaagcctgccccgcgaccctccacggcgccaccg
ccgccgagacgggcggcggagaccgcgcgagcgcgcgcgcgaggcaccgcggccgcggag
gcggacgacatcagcggcacggacaccggcgagtcggactgggacggggacggatccgac
gacgccgacggcggctccgacgacgacgacgacgacgtcgagcccgagagccccgaggat
ctcgaggagatcgcgccccccgcgcgcggtcgcggtcgcggtcgtcggcgtgcctccgac
gccgccgcggcggcgcctcgcggccgccgccgcgccgccgcagccgccgccgctcgacag
aaccgacggcgcgaggcgaaccgtcccgcgagggaagaggaagaggaagaggacgaggag
gaggaagaggaggaggaagaggtcatcttcgacggcggcctgcggctccccgcggagacg
tacgaccgtctcctcgagcaccagaagacgagcatcaagtggctgtgggagattcactgc
cagcgcgccggcggcgtcgtcggagacgagatgggattggggaagaccgtccaagtcgcc
gcgtttctgtgcgcgctcgaacgctccggtctgtaccagcccacgctcatcgtgtgcccg
gcgacgatgctcaggcagtggcgccgcgagcttcgcgcgtgggcgccgaagctgaactgc
ggcatcctccacgagagcgcggtgagcgcggcctcgcgcgccgcggcgcgcggatcgaag
aaacaggcgcggtgtaacatcatccgcgagcgcgtccgagacccgaagggcgtcctcctc
acgacgtacgagcacctgcgcgtgatgcgcgatcatctcttacccgtgcggtgggggtac
gccatcttggacgagggacacaagatacgaaacccggacgcggacgtgacgatatgcgcg
aagcaacttcagacggtgcaccggctcgtcatgacgggcgcgccgattcaaaaccgactc
gccgagctctggtcgctgttcgacttctgcttccccgggaagctcgggaccctcccggtg
ttccaagcgcagttcgcggtgccgattcaggtgggcgggtactccaacgcgtcgcagcag
caagtcacgaccgcgtatcgatgcgcgtcgatgctgaaggagctcatctccccgtacctc
ctgcgaaggatgaaggcggacgtcgacattcagctcccgacgaagacggagcaagtgtta
ttttgtccgatgacgcaagagcagcgagaggcgtaccgggcgtacgtgcactcgcgcgac
gtcgaggagattctcgagggcaggcgcgaggccctgggggggattgacgtcctgcggaag
attgtgaatcacccggatttactcgaacgacgcacgaaagccgcgcacgaaaagtacggc
gaagtcgaacgcagcggcaagcagctcgtcacgcaaaaagtgctcgagctgtggaaagag
caagggcaccgagtcttgctcttctcgcagacgcagcagatgttagatattctcgaggcg
atggtcgcgaaggcggggtacccgtaccgtagaatggacggcgcgacgccggtgtcgcaa
cgcatgacgctcatcgacgagttcaacacggacgcgaacgtgttcgtgttcttgttgacg
acgaaggttggcggtctcggagttaacttaacgggcgcagaccgggtgttactgtacgac
ccggactggaacccgagcacggacgcgcaagcgcgcgaacgcgcgtggcgaatcgggcaa
acgcgcgaggtcacggtgtatcgcttagtcaccgccgggacgatcgaagagaaggtgtac
cacaggcagatatacaaggagttcctcacgtccaaagttctgaaagacccgaagcagcga
cggtttttcaaagcgaaagacctcgcggacttgttcacgtgggaggaggataaccacgga
caaggcgtcggcggcgacggacagatcgaaaccgcggagttattcgcggaggtcgaaggc
gagattcgcgccgcggacgtcgccgaggccgaggacgacgaggccgaggacgaggacgag
gacgacggcggcgtcggcggtctgaccgcgaaagatatcgacggcgcgtcgccggaaagc
gcggacgacaccgcgtgggacatagacgcggaccccgcggcggcggcggcggcggcgcgg
aaagcggcgaagagcaaaccgggcgggaaacgattcacgatcgcgacggaccgctccgcg
ggggcgcgcgccgcgcagaccggcggcgacggcgacgcggcgatcatgcgatcgctcttc
ggcggcggcggcggcggcggcggcaccggcgcggagggcgccgcgggcgaaccctcgacg
ggcgcgggactgatcagaggcgcgatgtcccacgacgcgatcatgcgagcgccgaacggc
cgcgatcacctcgtcggcggcggcggcagcgccgcgctcgaggccgaccgcgtcgcgcgg
agggcggaggaggcgctccggcagtcgcgcgtcgcgcgaggcagcgcgggcgtggcggtg
ccgacgtggacggggcggagcggcgccgcgggcgcgcccgtcggcgccgtctccgccgcc
tcggcgaggcggttcggtcggtccgtccccggcgtcggcgtcggcggcggcggcgggcgg
ttcggaagcggcggcggcggcggcggcggcgcggggatcgcggggataggccaaggcgcg
atggggtcgcagacgctcttgcagcggatacggcagcgagacgccgccgcgggggaggcg
gcagcggcggcggcggcgggggcggacttcgacgaaggcgacgacgacgcggaggcggag
acgctcttgcgcgagatcgtcgatttcctgcgagcgcgcccgtcaggccgcgcgccgacg
gggctcgtcgtggacgcgttccaacacagggtgagctcgcggcggacgcagatgttccgc
aggttgttgaagacggcggcggcgctcgagaggaacccgccggatgccaacggacgcggc
ggcggcgcgacgtggtgcctgaaggacgagttcaaagacgcgtag
DBGET
integrated database retrieval system