Micromonas pusilla: MICPUCDRAFT_56835
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Entry
MICPUCDRAFT_56835 CDS
T02696
Name
(RefSeq) transcription elongation-nucleosome displacement protein Spt6
KO
K11292
transcription elongation factor SPT6
Organism
mpp
Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpp03021
]
MICPUCDRAFT_56835
03036 Chromosome and associated proteins [BR:
mpp03036
]
MICPUCDRAFT_56835
Transcription machinery [BR:
mpp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MICPUCDRAFT_56835
Chromosome and associated proteins [BR:
mpp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
MICPUCDRAFT_56835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
Spt6_S1
Tex_central_region
HHH_9
SPT6_acidic
HHH_3
HTH_44
DUF8669
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
9682508
NCBI-ProteinID:
XP_003057540
JGI:
56835
UniProt:
C1MN98
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MSDDDAAAPAAAPPEDAPPAATEKTEDAPPAVKAERADADDDGDDDDDDDDDDAPGSPVP
PGSPKAPSSSPPMADDDDDSDDDDGPVVARRRQRGAVTVVVDDDDSDDDDEDDKRRKKRK
AMELDEDDYDLLEDNLVTGFTRKEKKKRIGKKSEKDKAAEKAAKKGGDKPKTMAEVERDL
FGGSDDEELEEEDEDDDVSKEKKIKPAVVKDEKDFVDYDDEDSEDEFADFIEREEGEGPR
PKKIKSHVPGVRSDQLQDAFDIFGDVGELQAMFAQRDRGDDEGDLGERFDEESEYETDEE
EDDGVALEDEGDDALDRPDKKKKRRRRRKTSARSAAAGRPGRGSWLHAFEPSVVREQMLT
AKDDEIRETDWPERMQLDARVTPFKKEDAAAEAKWILDRLMGVGSVRDAPTFGGELLLRG
WADDESQDEHEDRVRNIEENERGNLPKEEAEAAEAAIADLLCMTHLEGLEIAFIAQNLKD
RVAPLLRGRRDDSRPPPRDSNLAVLERRVHRRDVLHEVLEWDKRHARMTRRKAELLRKFG
GVVEVLGDDHPDLDELAALMNKCEDARAEETLDDVEAKLTLRFDEEIHQFLTSEAKGGIK
KSGAESTHVRPLNRTAYAHHRKKGLRDLLPMYGATPAALAQSLNSYRRNAGTENQVVPDM
MPEDAASVYVGEETGYGDVSVVLKALTHVAAAELSVEPSVRAWMRVVVRRKAQVWTQPTP
KGTIEIDPFHPLARVKRLQNKPISEFTGTEFAAVLRAYDEGLITLRVALPEKVIDDVMAE
AEQAYLLEDVSEIADAWNALRKDALHLGLKKHLAVSLTKSATVLLAREAIAEVKRECGEA
LWPKISNRPWAPEIKSTEEYHDDEVDVRVLAAVWGPGTPATTFAMLDAEGELVDFLECPN
IAVRAAGPFAGQSAAGQRRDADMNRLVQFMIEHRPHVVAVAASSNAGMNCKFLREAARQA
VEKIVEDHARAIPEEVNTIEVHFVDDTIPALAGASAAMREELREHKEEVRHATCVGRYLR
NPAGIVAALASGGEAASLTLSTLQDALTEDERLAVFTRALADVVNQVGVDVNACVAHPWQ
QKALNYVAGLGARKAAAVVAAVRASDGGALETRAELVYELGIVGPIVFRNAASSLRVVDD
DILDATRIHPERYAQTFEIIANALDYDLEQLKKASKAVQRKTVERALDPEHWEKFAELDL
RAYAEYLHGEGQGWIYQTLREVRVELHEPYGDIRGPWEPPTAWEEFALLTGETEHSLCEG
KIVQCTVRKLVRPNPTMGINAEVLVSLESGVTGKIQKEDLSDNHVNRLEDKVAVGQVISA
RVKPNGIDYEAGVVHLACAGSVLSREATQQWEAEKWGRTPYYSLQVMDGEIPKPKKKKRQ
ASRPSFIHRNINHPLFQNVTALQAQEILKTQDIGEVLLRPSSKGVTHLSLTVKFYDDMYV
HHDIKEGKKPGVGHTANLALGSPLTVDGVEYEDLDEVYARHVEPMVTNLKAMIRHRKFRR
GTKRDVDQRLKAEMARHPDTRPYALSVSFEHHGVFCLSSILSKSGNVHHEYISVKPEGFR
FRRMEFPTVDRMLAYFKVNPRAPVAAPAVEPPREEPRYDAYPPSQWQQQQPPPPMQSQWQ
QPPPQYQQYQPPPQYNQPPPAPPPGGGWGAPPVHAYQGAPPPMPGAPPPMQPPYHQQQQY
QRY
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgacgccgccgcgcccgccgcggcgcctcccgaggacgcgccgcccgcc
gcgacggagaagaccgaggacgcgccgcccgcggtgaaggcggagcgcgcggacgcggac
gacgacggcgacgacgacgacgacgacgacgacgacgacgcgcccgggtcgcccgtcccc
ccgggatcgcccaaggcgccgtcgtcctcgccgccgatggcggacgacgacgacgacagc
gacgacgacgacggcccggtcgtcgcgcgccgacgccagcgcggcgccgtcaccgtcgtc
gtcgacgacgacgacagcgacgacgacgacgaggacgacaagaggcggaagaagcgcaag
gcgatggagctcgacgaggacgattacgacctcctcgaggacaacctcgtgacgggattc
acgcgcaaggagaagaagaagcgcatcgggaagaaatcggagaaggacaaggcggcggag
aaggcggcgaagaagggcggcgacaagccgaagacgatggccgaggtggagcgcgatctc
ttcggcggctcggacgacgaggagctcgaggaggaggacgaagacgacgacgtctccaag
gagaaaaaaatcaaacccgccgtcgtgaaggatgaaaaagacttcgtggactacgacgac
gaggacagcgaggacgagttcgcggacttcatcgagcgtgaggagggcgaaggcccgagg
ccgaagaagatcaagtcgcacgtgccgggcgtgcggagcgaccagctgcaagacgcgttc
gacatcttcggagacgtcggcgagctccaggcgatgttcgcgcagagggaccggggcgac
gacgaaggcgaccttggcgaaaggttcgacgaagagagcgagtacgagacggacgaggag
gaggacgacggcgtcgcgctcgaggacgagggcgacgacgcgctcgatcgcccagataag
aagaagaaacggcggcgaagaagaaagacgtctgcgcgatccgcggcggcgggccgcccc
gggcgcgggtcctggctgcacgcgttcgagccgtccgtcgtccgcgagcagatgctcacg
gcgaaggacgacgagatccgagagacggactggccggagcgcatgcagctcgacgcgaga
gtgacgccgttcaagaaggaggacgccgccgccgaggcgaagtggatcttggatcgcctc
atgggcgtcggcagcgttcgagacgcgccgacgttcggcggcgagctcctccttcgcggg
tgggcggacgacgagtcgcaggacgagcacgaggaccgcgtgaggaacatcgaggagaac
gagcgcgggaacctcccgaaggaggaggcggaggcggcggaggcggccatcgcggatctg
ctgtgcatgacgcacctcgaagggctcgagatcgcgttcatcgcgcagaacctgaaggat
cgcgtcgcgccgctgctgcgcgggcggcgcgacgactcgcgcccgccgccgcgcgactcg
aacctcgcggtcctcgagcgcagggtgcaccgacgcgacgtcctgcacgaggttttggag
tgggataaacgacacgcgcgcatgacgcggagaaaggcggagctcttgcgaaagtttgga
ggcgtcgtcgaggtgttgggggacgatcacccagacctggacgagctcgcggcgctcatg
aacaagtgcgaggacgcgcgcgcggaggagacgctggacgacgtcgaggcgaagctcacg
ctgcggttcgacgaggagattcatcagtttctcacgtcggaggcgaagggcggcataaaa
aagtccggcgcggagtccacgcacgttcgcccgctgaaccgcacggcgtacgcgcaccac
aggaagaagggcctgcgcgacttgctcccgatgtacggcgcgacgcccgcggcgctcgcg
cagtcgctgaattcctaccgccgaaacgcggggacggagaatcaagtcgtcccggacatg
atgcccgaagacgccgcgtcggtgtacgtcggcgaagagaccgggtacggcgacgtctcc
gtcgtcctgaaagcgctgacgcacgtcgccgcggcggaactgtccgtggagccgtccgtg
cgcgcgtggatgcgcgtcgtcgtgcgccgcaaggcgcaagtgtggacgcagccgacgccg
aaggggacgatcgagatcgatccgtttcacccgctcgcgcgcgtgaagcgccttcagaac
aagcccatctccgagttcaccggcaccgagttcgcggcggtgctgcgcgcgtacgacgag
gggctcatcacgctgagagtagcgctcccggagaaggtgatcgacgacgtcatggctgag
gcggaacaggcgtacctcctcgaagacgtctccgagattgccgacgcgtggaacgcgctt
cgcaaggacgcgctgcacttgggactgaagaagcacctcgcggtgtcgctgacgaagagc
gcgacggtgctgctcgcgcgcgaggcgatcgcggaggtgaagcgcgagtgcggcgaggcg
ctgtggccgaagatttccaaccgcccgtgggcgccggagattaaatccaccgaggagtac
cacgacgacgaggtcgacgtccgagtcctcgccgcggtgtggggtcccggcacgcccgcg
acgacgttcgcgatgctcgacgcggagggtgagctcgtggacttcctcgagtgcccgaac
atcgcggtgcgcgccgccgggccgttcgccgggcagtccgccgcgggccaacgccgcgac
gccgacatgaatcgtctcgtgcagtttatgatcgaacaccgcccgcacgtcgtcgccgtc
gccgcgtcctcgaacgcggggatgaactgcaagtttctgcgggaagccgcgaggcaggct
gtggagaagatcgtcgaggatcacgcgcgcgcgattccggaggaagtgaacacgatcgag
gtgcacttcgtcgacgacacgattcccgcgctcgcgggcgcgtcggcggcgatgcgagaa
gaactcagagagcacaaggaggaggtgcgtcacgcgacgtgcgtcgggcggtacctgcgc
aaccccgcgggcatcgtcgcggcgctcgcgagcggcggcgaggcggcgtcgctgacgctc
tcgacgctccaggacgcgctcactgaggacgagcgtctcgcggtgttcacgcgagcgctc
gccgacgtcgtcaaccaagtcggcgtcgacgtcaacgcgtgcgtcgcgcacccgtggcag
caaaaggcgctcaactacgtcgcgggcttgggcgcgaggaaggcggccgccgtggtcgcc
gccgtgcgcgcgtccgacggcggcgcgctggagacgagagcggagctcgtgtacgagctc
gggatcgttggtccgatcgtgtttcgaaacgcggcgagcagccttcgcgtcgtggacgac
gacatcctggacgcgacgcggattcacccggagcgatacgcgcagacgtttgaaatcatc
gccaacgcgctcgattacgacctcgagcagctcaagaaggcgagcaaggcggtgcagcga
aagacggtcgagcgcgcgctcgatccggagcactgggagaagttcgcggagctggatctt
cgcgcgtacgcggagtacctccacggcgagggccaggggtggatctaccagacgttgaga
gaggtgcgcgtggagctccacgaaccgtacggagacattcgcgggccgtgggagcccccc
accgcgtgggaggagttcgcgctcctcacgggcgagaccgagcacagcctgtgcgagggg
aagatcgtgcagtgcacggtgaggaagctcgtgcggccgaacccgacgatggggatcaac
gcggaggtgctcgtgtctctcgagagcggcgtcacggggaagattcaaaaggaagattta
tccgataaccacgtgaaccgcctcgaggataaggtggcggtcgggcaggtcatctccgcg
cgcgtcaagccgaacgggatcgactacgaagccggggtggtgcatctcgcgtgcgccggg
agcgtgctgtcgcgcgaggcgacgcagcagtgggaggcggagaagtggggccgcacgccg
tactactcgcttcaggtgatggacggcgagattcccaaaccgaagaagaagaagaggcaa
gcgtcgcggccgagcttcattcacaggaacatcaaccacccgctgttccagaacgtcacc
gcgctgcaagcgcaggagattctcaagacgcaggacatcggcgaggtgctgctgcggccg
agcagcaagggcgtcacgcacctctcgctcacggtgaaattctacgacgacatgtacgtg
catcacgacatcaaggaagggaaaaagcccggcgtcggtcacaccgcgaacctcgcgctg
gggtccccgctcaccgtggacggcgtcgagtacgaagacctggacgaggtgtacgcgcgg
cacgtcgagccgatggtgacgaacctcaaggctatgattcgccaccggaaattccgacgc
gggacgaagagagacgtggaccagcgtctcaaggcggagatggcgcggcacccggacacg
cggccgtacgcgctgtccgtgagcttcgaacaccacggcgtgttttgcctatcgtccatc
ctcagcaagagcgggaacgtgcatcacgagtacatcagcgtcaagccggaggggtttcgg
ttccgccggatggagttccccaccgtggatcgcatgctcgcgtatttcaaggtgaatcct
cgcgcgcccgtcgcggcgcccgcggtcgagccgccccgcgaggagccgcggtacgacgcg
tacccgccgagccagtggcagcagcagcagccgccgccgccgatgcagagccagtggcag
cagccgccgccgcagtatcagcagtatcagccgccgccgcagtacaatcagccgccgccg
gcgccgccgccgggcgggggatggggcgcgccgccggtgcacgcgtaccagggcgcgccg
ccgccgatgccgggcgcgccgccgccgatgcagccgccgtatcaccagcagcagcagtat
cagcggtactga
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