KEGG   Micromonas pusilla: MICPUCDRAFT_57276
Entry
MICPUCDRAFT_57276 CDS       T02696                                 
Name
(RefSeq) NURF complex component
  KO
K10752  histone-binding protein RBBP4
Organism
mpp  Micromonas pusilla
Pathway
mpp03082  ATP-dependent chromatin remodeling
mpp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MICPUCDRAFT_57276
   03083 Polycomb repressive complex
    MICPUCDRAFT_57276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpp03036]
    MICPUCDRAFT_57276
Chromosome and associated proteins [BR:mpp03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     MICPUCDRAFT_57276
  Histone modification proteins
   HAT complexes
    HATB complex
     MICPUCDRAFT_57276
   HDAC complexes
    Sin3A-HDAC complex
     MICPUCDRAFT_57276
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     MICPUCDRAFT_57276
    PRC2.2
     MICPUCDRAFT_57276
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     MICPUCDRAFT_57276
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    MICPUCDRAFT_57276
  Chromatin remodeling factors
   NuRD complex
    MICPUCDRAFT_57276
   NuRF complex
    MICPUCDRAFT_57276
   NuRF complex (fruit fly)
    MICPUCDRAFT_57276
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 CAF1C_H4-bd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd Beta-prop_EML WD40_WDHD1_1st Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 MIOS_WD40
Other DBs
NCBI-GeneID: 9683188
NCBI-ProteinID: XP_003058120
JGI: 57276
UniProt: C1MQF8
LinkDB
Position
Unknown
AA seq 526 aa
MPTDADSYGRWKNLVPFLYDWFAHHRLVWPSLSVRWGAVLETNEYKHKQRLYLSEQTDGS
PFFPNTLVVANAEVIKRRVAAAEHMVFEEETRSAFVKGFKTIIHPGEVNKMREFQASPNL
LVTHTDAPELLVWNTETQPHRKTGPAAQRDAPNGGRGEDGELCPIAGALKPSRPDLVLRG
HGDDAEFALDVHREGFKVASGGKDRNVLLWDVSDYDQGSLCTNGKEGSGATGNGEGVGAK
SGDFDGAPSLAPKTTFEGHSDTVEDVSFHPSGASELCSVGDDNALIFWDARAGTKPAHKV
TDAHGEDVHTVDWSLLDENVILTGSADATVKLWLASADFDFFFAGVSTSWDRRKLGALGA
ECCVHTFAMHKDAVTCVQWCPDQKGMFGSSADDGYLNVWDVNKIGAAQSAEKKKTAAPEI
VFQHAGHKTSVTDFHWNPFDPMTIASVSSGDGGNTLQMWRMNDLIYRPEEEALAELEKHK
ATICGVRAAAAGGGGEGGGDAQEKESAEPTGDGAAAPEGAGAMETD
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgccgacggacgcggactcctacgggcgatggaagaacctcgtcccgttcctgtacgac
tggttcgcgcaccacaggctcgtgtggccgtccctctccgtgcgatggggcgcggtcctg
gagacgaacgagtacaagcacaagcagcgcctgtacctgagcgagcaaacggacgggtcg
ccgtttttcccaaacaccctcgtcgtcgccaacgcggaggtcatcaaacgccgcgtcgcc
gccgcggagcacatggtgttcgaagaggagacgcgcagcgcgttcgtgaagggcttcaag
acgattatccacccgggggaggtgaacaagatgcgcgagttccaggcgtcgccgaacttg
ttggtcacgcacacggacgcgccggaacttctcgtgtggaacacggagacgcagccgcac
agaaagacgggcccggccgcgcagagggacgcgccgaacggcggcagaggcgaggatggg
gagctctgcccgatcgcgggcgcgctgaagccgtcgagaccggatctcgtcttgagaggg
cacggcgacgacgccgagttcgcgctcgacgtgcaccgcgagggtttcaaagtcgcgtcc
ggcgggaaggatcgtaacgtccttctgtgggacgtttccgattacgatcaaggatcgctg
tgcacgaacgggaaggaagggagcggcgcgaccgggaacggtgagggcgtcggcgcgaag
agcggcgatttcgacggcgccccgagcctcgcgccgaagacgacgttcgaaggccactcg
gacaccgtggaggacgtgtcgttccacccctccggcgcgagcgagctgtgcagcgtcggg
gacgacaacgcgctgatcttttgggacgcgcgcgcggggacgaaacccgcgcacaaggtg
acggacgcgcacggggaggacgtgcacaccgtggactggtctctgctggacgaaaatgta
atcctcacgggctccgcggacgcgaccgtcaaactttggttggcgagtgctgactttgac
ttcttttttgctggtgtctctacttcatgggaccgacgcaagctcggcgcgctcggcgcg
gagtgctgcgtgcacacgttcgcgatgcacaaagacgcggtaacgtgcgtgcagtggtgc
ccggaccagaaagggatgttcggctcgtccgcggacgacgggtacctcaacgtctgggac
gtgaacaagattggcgcggcgcagagcgcggagaagaagaaaaccgcggcgccggagatt
gtcttccaacacgccgggcacaaaacgtccgtcacggacttccactggaacccgttcgat
ccgatgacgatcgcgagcgtgagctccggggacggcgggaacacgctgcagatgtggagg
atgaacgacttgatctaccgccccgaggaagaggcgctcgcggagctggagaagcacaag
gcgaccatctgcggcgtgcgcgcggcggcggcgggcggcggcggtgagggggggggcgac
gcgcaggagaaggagagcgcggaaccgaccggggacggcgcggccgcccccgaaggcgcg
ggagcgatggagacggactga

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