Micromonas pusilla: MICPUCDRAFT_57638
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Entry
MICPUCDRAFT_57638 CDS
T02696
Symbol
RAD54B
Name
(RefSeq) SNF2 super family
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
mpp
Micromonas pusilla
Pathway
mpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MICPUCDRAFT_57638 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpp03400
]
MICPUCDRAFT_57638 (RAD54B)
DNA repair and recombination proteins [BR:
mpp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
MICPUCDRAFT_57638 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
PTH2
AAA_22
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
9683358
NCBI-ProteinID:
XP_003057920
JGI:
57638
UniProt:
C1MRF8
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MKRAAEEDAAAAPRAPLSPKANLNPTRPPAGVMPFRPPGAGFRPPTKAAAFRPPMKTAGG
GSGAGTAFRAPFAAPVARAPAPARPAPSAPSSASAPPSTSTSTTTKAYFSCLYAKRKAAK
NRSSKSWLDGICVYEPPFTTLLDETGKALTKSRAGTCVVGTEMDIGNWNVEVADAISESD
YQSGKALLGGGGGGGGGGGGGALPSSLSAPRGRTAAFRPIKMGAPGDDSRATAPGGASAA
HTPAARPPLHDPAREGATLLSSPGDVFPGFGPASTAVVVDPILGASLRPHQRDGVRFMFE
CVSGRRAGGHRGCLLAHEMGMGKTLQVIALLWTLLKQGPRGTPMVKKAVIACPASLVSNW
GAEMKKWLGQTRLAPLLVEGGDKDAKSLFDDWALAHQKRYAVLVTSYETLRSYASKIESG
GVDLLVCDEAHRLKNAKGDTLTVAALRALKCNRRVLLSGTPIQNDLTEYFGLMDFACPGL
LGDLGPFKKIFSGPIERSRDKRASADERTIGAARGEELARMTREYVHRASASEVNARHGL
PPKTEYVVFVRLSPTQAALYGALLKTAAVRGALGGKGSPLTALQKLQRLCNSARLLASGG
GGGGGDVVDENDAEEDIRALRARVPRGYDDPFDATADALSPSFSGKLAVLLTMLRATTPG
VDKTVVVSGFTSTLDLIAAALSAAGVGGKVSSRLDGSVAPNLRGAIVNKFNDGKGGDVFL
LSCKAGGVGLNLVGANRLVLFDSDWNPANDLQALARVWREGQKRPVTIYRLVSTGTVEER
VFQRQILKGDVADAMGMASVNKRGGDGDGGGGGGGGGAGKMSLSKEELRDLFRFDERTVC
NTVEVLRTGGGGDGKGKTRELPKHWRECASAADGGIPDPPLASAMALTHARPGDDDGGGG
GATGGDPGMRVVSFVARMPSSSESAATVDAERGSRKAEDEAAATA
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcggccgaggaggatgccgccgcggcgccgcgggcgccgctctcgccgaag
gcgaacctcaacccgacccgcccccccgcgggcgtgatgccgttccgccccccgggcgcc
ggcttccgtcctccgacgaaggccgccgcgttccgtcctccgatgaaaaccgccggagga
ggatctggcgcgggcaccgcgttccgcgcaccgttcgcggccccggtcgcgcgcgcgccc
gcgcccgcgcgaccggcgccctccgcgccgtcgtccgcgtccgcgccgccgtcgacgtcg
acctcgacgacgacgaaggcgtacttctcgtgcctctacgcgaagcgaaaggctgcgaag
aatcgctcgtcgaagtcgtggctggacggcatctgcgtgtacgagcccccgttcacgacg
ctgttggacgagaccgggaaagcgttgacgaagtccagggcgggtacgtgcgtcgtcggg
acggagatggacatcgggaactggaacgtcgaggtcgcggacgcgatctcggagagcgac
taccagtccggcaaggcgctcctcggcggcggcggcggcggcggcggcggcggcggcggg
ggcgcgcttccgtcgtcgctctcggcgccgcgcgggcgcacggcggcgttccggccgata
aagatgggcgccccgggagacgactcgcgcgcgaccgcgcccggcggcgcgtccgcggcg
cacacccccgcggcgcgaccgccgctgcacgaccccgcgcgcgagggcgcgacgctgttg
tcgtcccccggcgacgttttccccgggttcgggcccgcgtccaccgccgtcgtcgtggac
ccgatcctcggcgcgtccttgcgaccgcaccagagggacggcgtgcgattcatgttcgag
tgcgtctccggaagacgcgcgggagggcaccgcgggtgcctcctcgcgcacgagatgggc
atggggaagacgctccaagtcatcgcgctgctgtggacgcttctgaagcaaggcccgcgc
gggaccccgatggtgaagaaagccgtcatcgcgtgccccgcgagcttggtctcgaactgg
ggcgcggagatgaagaagtggctcgggcagacgcggctcgcgccgctgctcgtcgagggc
ggggacaaagacgcgaagtcgctgttcgacgactgggcgttggcgcatcagaagcgatac
gccgtgctggtgacgtcgtacgagacgctgcggtcgtacgcgtcgaagatcgagagcggc
ggcgtggaccttctcgtgtgcgacgaagcgcatcggctgaagaacgcgaaaggggacacg
ctgacggtcgcggcgttgcgcgcgctgaagtgtaatcgccgcgtgttgctgtcggggacg
ccgattcaaaacgatctcacggaatactttggtctcatggacttcgcgtgcccggggctg
ctcggggatttagggccgttcaagaagatcttctcggggccgatcgagcggtcgcgagat
aagcgcgcgagcgcggatgagcgaacgatcggcgccgcgcgcggcgaagagctcgcgagg
atgacgcgcgagtacgtccaccgagcgtccgcgtcggaggtgaacgcgcgtcacggactg
ccgccgaagacggagtacgtcgtgttcgttcggttgtctccgacgcaggcggcgctgtac
ggcgccctgttgaagactgccgcggtgagaggcgcgctggggggtaaaggaagcccgctg
acggcgttacagaagctccagcggttgtgcaacagcgcgcggctgttagcgagcggcggc
ggcggcggcggcggggacgtcgtcgacgaaaacgacgccgaggaggatatccgcgctctc
agggcgcgagtcccgcgcgggtacgacgatccgttcgacgcgaccgcggacgcgctgtcg
ccttccttctccggaaagctcgcggtgttgttgacgatgctgcgggcgacgaccccgggg
gtggacaagacggtcgtcgtctcggggttcacgtccacgctggacttgatcgcggcggcg
ttgagcgccgcgggcgtcggcgggaaggtatcgtcgcggctcgacgggagcgtcgcgccg
aacctgcgaggcgcgatcgtgaacaagttcaacgacggcaagggcggcgacgtgttcctg
ttgtcgtgtaaagccggcggcgtcgggctgaacctcgtcggcgcgaaccggctggtgttg
ttcgactcggactggaaccccgcgaacgatctccaggcgctcgcgcgcgtgtggcgggaa
gggcagaagcgcccggtgaccatctaccggctcgtgtccacggggacggtagaggagagg
gtgttccagaggcagatcttgaagggggacgtcgcggacgcgatggggatggcgtccgtg
aacaaacgcggcggcgacggcgacggcggcggcggcggcggcggcggcggcgccgggaag
atgtccctgtccaaggaggagcttcgcgatttgttccggttcgacgagcgcacggtctgc
aacaccgtggaggttctgcgcaccggcggcggcggcgacgggaagggcaagacgcgcgag
ctcccgaagcactggcgcgagtgcgcgagcgcggcggacggcgggatcccggacccgccg
ctcgcgagcgcgatggcgctgacgcacgcgcggcccggggatgacgacggcggcggcggc
ggcgcgaccggcggcgacccggggatgcgcgtcgtgtcgttcgtcgcgcggatgccgtcg
tcctcggaatcggcggcgacggtcgacgcggagagggggtcgcggaaggcggaagacgag
gcggcggcgacggcgtga
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