KEGG   Micromonas pusilla: MICPUCDRAFT_57834
Entry
MICPUCDRAFT_57834 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
mpp  Micromonas pusilla
Pathway
mpp03013  Nucleocytoplasmic transport
mpp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MICPUCDRAFT_57834
   03015 mRNA surveillance pathway
    MICPUCDRAFT_57834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_57834
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     MICPUCDRAFT_57834
   mRNA cycle factors
    P-body specific factors
     MICPUCDRAFT_57834
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 9684184
NCBI-ProteinID: XP_003058745
JGI: 57834
UniProt: C1MSV2
LinkDB
Position
Unknown
AA seq 417 aa
MPRTKAVVRNLPPDQDASSFFASVDASGFDGTTCAYRDFVQGKRKTRVVIPSVAHVGFDT
ERALFDFAAAFDARAYDDAFGGEWRARVEYAPYQKIPRLKPRLDKREGTIERDADYKKFV
EKLAEDPVAMQSAEVLLDRREREKKALERANGGKAPVRLSALMKHLIAKREAERSKLERK
KKKAKARKEKAAAGGGGGDRTGGGAGGTAEDERTLGKKAKKWARKKAKEAEAAAAAAAAG
GKSNANAAGGGGKGKRPDASEKQTQKLMRRMTVNDGGGGDRTAGGVPKPKSGSGKRAGGG
GKGGDGGDAAQTPAAMKTPKILARPQTTSTAPAPANGGGGGVGASKPSKKKARPDVQIYV
APGARKGDGGGGGGGGGGGGEKGGVSAPKPGGGGGGGNKKHKHPPRAKGAVPAPKVG
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgccgcgcaccaaggcggtcgtccggaacctcccccccgaccaagacgcgtcgtcgttc
ttcgcctccgtcgacgcgagcgggttcgacggaaccacgtgcgcgtatcgcgacttcgtc
caagggaagcgcaagacgcgcgtggtgatcccgtccgtcgcgcacgtcgggttcgacacc
gagcgcgcgctgttcgacttcgccgccgcgttcgacgcgagggcgtacgacgacgcgttc
ggcggggaatggcgcgcgagggtggagtacgcgccgtaccaaaagatcccgcgactcaag
ccgcgccttgacaagcgcgagggcacgatcgagcgcgacgcggactataaaaagttcgtc
gaaaagctcgcggaggacccggtcgcgatgcagagcgcggaggtgttgctggaccggagg
gagcgcgagaagaaggcgctggagcgcgcgaacggagggaaggcgccggtgcgactgagc
gcgctgatgaagcatctcatcgcgaaacgcgaagccgagcggagcaagctcgagcggaag
aagaagaaggcgaaggcgaggaaagagaaggcggccgcgggcggcggcggcggggatcga
accggcggcggcgcggggggcaccgcggaggacgaacggacgttagggaagaaggcgaag
aagtgggcgaggaagaaggctaaggaggcggaggcggcggcggcggcggcggcggcgggt
gggaaatcgaacgcgaacgccgccggcggaggagggaaggggaagcgacccgacgcgtcc
gagaagcagacgcagaagctcatgcgacgcatgacggtaaacgacggcggcggcggggat
cgaaccgccggcggggtcccgaagccgaagagcggcagcgggaagagggcgggcggggga
ggaaagggcggcgacggcggcgacgccgcgcaaacgccggcggcgatgaaaacgccgaag
atcctcgcgcggccgcagacgacctcgaccgcgcccgcgcccgcgaacggcggcggcggc
ggggtgggcgcgagtaaaccctcgaagaagaaggcgaggccggacgtgcagatatatgtc
gcgccgggcgcgcgcaaaggcgacggcggcggcggcggcggcggcggcggcggcggcgga
gagaagggcggcgtctccgcgccgaaacccggcggcggcggcggcggtgggaacaagaag
cataagcacccaccgcgagcgaagggcgccgtccccgcgccgaaagtaggatga

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