KEGG   Micromonas pusilla: MICPUCDRAFT_58482
Entry
MICPUCDRAFT_58482 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
mpp  Micromonas pusilla
Pathway
mpp03018  RNA degradation
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_58482
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUCDRAFT_58482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_58482
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_58482
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MICPUCDRAFT_58482
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MICPUCDRAFT_58482
Spliceosome [BR:mpp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MICPUCDRAFT_58482
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 9684490
NCBI-ProteinID: XP_003058677
JGI: 58482
UniProt: C1MSG8
LinkDB
Position
Unknown
AA seq 106 aa
MSGKKETVLDLGKFIDKGVRVKLSGGREVTGTLKGFDQLLNLVLDECVESLRDPEDPLKI
SDKTRKLGLIVCRGTSVMVVSGLDGMEEIANPFTEGGEAVMDGPAE
NT seq 321 nt   +upstreamnt  +downstreamnt
atgagcggcaagaaggagaccgtcctcgatctcgggaagttcatcgacaagggcgtccgg
gtcaaactcagcggcggccgcgaggtgaccgggacgctgaaagggttcgatcagctctta
aacctcgtcctggacgagtgcgtcgagagcctgcgcgatcccgaggaccctctgaagata
tccgacaagacgcggaaactcgggctgatcgtgtgccgcgggacgtccgtgatggtcgtg
agcgggttggacggcatggaggagatcgcgaacccgttcacggagggtggggaggcggtg
atggacgggcccgcggagtga

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