KEGG   Micromonas pusilla: MICPUCDRAFT_58866
Entry
MICPUCDRAFT_58866 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
mpp  Micromonas pusilla
Pathway
mpp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MICPUCDRAFT_58866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpp03021]
    MICPUCDRAFT_58866
Transcription machinery [BR:mpp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     MICPUCDRAFT_58866
SSDB
Motif
Pfam: TFIIF_alpha HTH_56 TAF4
Other DBs
NCBI-GeneID: 9684664
NCBI-ProteinID: XP_003059522
JGI: 58866
UniProt: C1MUM7
LinkDB
Position
Unknown
AA seq 557 aa
MISRLLVAHTISRVAAMGDIVPAPVKLRFKFASEDAHVVVPVPPPATPANAIAAVLSARA
DVTTMLRETYPGLALELCDPATGRPFPAETPAFADDAEVHGVLTKAYAVRAFAPVRRYVV
GRFAGAKPPKFKSGKAAPVDWQLRTVTSDVETAFPPLALANGGKQKSVFTGAREAGQTGN
FYLLMMQANTSDVCAVPLERWYNFRADASRRVLTLEEAEDQIEAAGKRATNASKWLEAHT
GGGGDDDDGLSDSGSRDVKAAVSSDDDDDNDYDSKRKRKKKAAAGDDDDEKKDAANAENA
PGARGIAKVEGDDWEHDEGASDDEGAGEADELEMEEPPPPPPPRLAHDSDDDGDDELDDE
GKEMRRLLGKQEDGTIMRGLGGSAEGLGGMNGGLSDSDSDSEFVDPDQEELHPFLLQQQN
KLQARAAEMAKQEAEAMARATAASEAAAAAAAVKQEPTAAGAGIKRARSDDDVAARPGKA
AKTEREPAAVAAAYPPIEAALRELLRRGAKPTTKDVTKQLRKRGLLNTDADKNELKATIS
RIARIRKEGEKSFVVLL
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgatctcgaggctgctcgtcgcgcacacgatctcgcgcgtcgccgccatgggggacatc
gtccccgcgcccgtcaagctgcggttcaagttcgcgagcgaggacgcgcacgtcgtcgtg
cccgtcccgccccccgcgacgcccgcgaacgcgatcgccgcggtgctcagcgcgagggcg
gacgtgacgacgatgctgagagaaacctaccccgggttagcgctcgagctgtgcgatccc
gcgacgggaaggccgttccccgcggagacgcccgcgttcgcggacgacgcggaagtccac
ggcgtcctgacgaaggcctacgccgtcagagcgttcgcgcccgtgcgtcggtacgtcgtc
gggcggttcgcgggcgcgaagccgcccaagtttaagagcggaaaggccgcgcccgtggac
tggcagctcaggacggtgacgtccgacgtcgagaccgcgttcccgccgctcgcgctcgcg
aacgggggcaagcaaaagagcgtcttcaccggcgcgagagaggcggggcagacggggaac
ttctacctgctcatgatgcaagcgaacacgtcggacgtgtgcgcggtgcctctggagcga
tggtacaactttcgcgcggacgcgtcgcgtcgcgtgctgacgttggaggaggcggaggat
cagatcgaggccgcggggaaacgagcgacgaacgcgagcaagtggctcgaggcacacacc
ggcggcggcggcgacgacgacgacggcctcagcgacagcggctcgagggacgtgaaagcc
gcggtgtcgagcgacgacgacgacgacaacgattacgactcgaagagaaagaggaaaaag
aaagccgcagcgggggacgacgacgacgagaaaaaagacgccgcgaacgcggagaacgcg
ccgggcgcgcgaggtatcgcgaaagtcgagggcgacgactgggagcacgacgagggcgcg
agcgacgacgagggcgccggggaggcggacgagctcgagatggaggagccgccgccgccg
ccgccgccgaggctcgcgcacgacagcgacgacgacggcgacgacgagctggacgacgag
ggcaaggagatgcgcaggctgctcgggaagcaagaggacgggacgatcatgcgcgggtta
gggggcagcgcggagggcctcgggggaatgaacggaggcctgagcgacagcgacagcgac
tccgagtttgtggacccggaccaggaggagctgcacccgtttctcttgcagcagcagaac
aagcttcaggcgcgcgccgcggagatggcgaagcaggaggcggaggcgatggcgcgcgcg
accgccgcttctgaagcggcggcggcggcggcggccgtgaagcaagagccgacggcggcc
ggcgccgggatcaagcgcgcgaggtcggacgacgacgtcgccgccaggccggggaaggcg
gcgaagacggagcgcgagcccgccgccgtcgccgcggcgtatccgccgatcgaggccgcg
ctgcgggagctcctccggcgcggggcgaagccgacgacgaaggacgtcacgaagcagctg
cggaagagagggctgctcaacacggacgcggacaagaacgagctcaaggcgacgatatcg
cgcatcgcgaggattcgcaaggagggcgaaaagagcttcgtcgtgttgctgtag

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