Micromonas pusilla: MICPUCDRAFT_58866
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Entry
MICPUCDRAFT_58866 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mpp
Micromonas pusilla
Pathway
mpp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MICPUCDRAFT_58866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpp03021
]
MICPUCDRAFT_58866
Transcription machinery [BR:
mpp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
MICPUCDRAFT_58866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
HTH_56
TAF4
Motif
Other DBs
NCBI-GeneID:
9684664
NCBI-ProteinID:
XP_003059522
JGI:
58866
UniProt:
C1MUM7
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MISRLLVAHTISRVAAMGDIVPAPVKLRFKFASEDAHVVVPVPPPATPANAIAAVLSARA
DVTTMLRETYPGLALELCDPATGRPFPAETPAFADDAEVHGVLTKAYAVRAFAPVRRYVV
GRFAGAKPPKFKSGKAAPVDWQLRTVTSDVETAFPPLALANGGKQKSVFTGAREAGQTGN
FYLLMMQANTSDVCAVPLERWYNFRADASRRVLTLEEAEDQIEAAGKRATNASKWLEAHT
GGGGDDDDGLSDSGSRDVKAAVSSDDDDDNDYDSKRKRKKKAAAGDDDDEKKDAANAENA
PGARGIAKVEGDDWEHDEGASDDEGAGEADELEMEEPPPPPPPRLAHDSDDDGDDELDDE
GKEMRRLLGKQEDGTIMRGLGGSAEGLGGMNGGLSDSDSDSEFVDPDQEELHPFLLQQQN
KLQARAAEMAKQEAEAMARATAASEAAAAAAAVKQEPTAAGAGIKRARSDDDVAARPGKA
AKTEREPAAVAAAYPPIEAALRELLRRGAKPTTKDVTKQLRKRGLLNTDADKNELKATIS
RIARIRKEGEKSFVVLL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgaggctgctcgtcgcgcacacgatctcgcgcgtcgccgccatgggggacatc
gtccccgcgcccgtcaagctgcggttcaagttcgcgagcgaggacgcgcacgtcgtcgtg
cccgtcccgccccccgcgacgcccgcgaacgcgatcgccgcggtgctcagcgcgagggcg
gacgtgacgacgatgctgagagaaacctaccccgggttagcgctcgagctgtgcgatccc
gcgacgggaaggccgttccccgcggagacgcccgcgttcgcggacgacgcggaagtccac
ggcgtcctgacgaaggcctacgccgtcagagcgttcgcgcccgtgcgtcggtacgtcgtc
gggcggttcgcgggcgcgaagccgcccaagtttaagagcggaaaggccgcgcccgtggac
tggcagctcaggacggtgacgtccgacgtcgagaccgcgttcccgccgctcgcgctcgcg
aacgggggcaagcaaaagagcgtcttcaccggcgcgagagaggcggggcagacggggaac
ttctacctgctcatgatgcaagcgaacacgtcggacgtgtgcgcggtgcctctggagcga
tggtacaactttcgcgcggacgcgtcgcgtcgcgtgctgacgttggaggaggcggaggat
cagatcgaggccgcggggaaacgagcgacgaacgcgagcaagtggctcgaggcacacacc
ggcggcggcggcgacgacgacgacggcctcagcgacagcggctcgagggacgtgaaagcc
gcggtgtcgagcgacgacgacgacgacaacgattacgactcgaagagaaagaggaaaaag
aaagccgcagcgggggacgacgacgacgagaaaaaagacgccgcgaacgcggagaacgcg
ccgggcgcgcgaggtatcgcgaaagtcgagggcgacgactgggagcacgacgagggcgcg
agcgacgacgagggcgccggggaggcggacgagctcgagatggaggagccgccgccgccg
ccgccgccgaggctcgcgcacgacagcgacgacgacggcgacgacgagctggacgacgag
ggcaaggagatgcgcaggctgctcgggaagcaagaggacgggacgatcatgcgcgggtta
gggggcagcgcggagggcctcgggggaatgaacggaggcctgagcgacagcgacagcgac
tccgagtttgtggacccggaccaggaggagctgcacccgtttctcttgcagcagcagaac
aagcttcaggcgcgcgccgcggagatggcgaagcaggaggcggaggcgatggcgcgcgcg
accgccgcttctgaagcggcggcggcggcggcggccgtgaagcaagagccgacggcggcc
ggcgccgggatcaagcgcgcgaggtcggacgacgacgtcgccgccaggccggggaaggcg
gcgaagacggagcgcgagcccgccgccgtcgccgcggcgtatccgccgatcgaggccgcg
ctgcgggagctcctccggcgcggggcgaagccgacgacgaaggacgtcacgaagcagctg
cggaagagagggctgctcaacacggacgcggacaagaacgagctcaaggcgacgatatcg
cgcatcgcgaggattcgcaaggagggcgaaaagagcttcgtcgtgttgctgtag
DBGET
integrated database retrieval system