KEGG   Micromonas pusilla: MICPUCDRAFT_6335
Entry
MICPUCDRAFT_6335  CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
mpp  Micromonas pusilla
Pathway
mpp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUCDRAFT_6335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_6335
Enzymes [BR:mpp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     MICPUCDRAFT_6335
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MICPUCDRAFT_6335
  mRNA degradation factors
   3'-5' decay
    Pan complex
     MICPUCDRAFT_6335
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-GeneID: 9681674
NCBI-ProteinID: XP_003056338
JGI: 6335
UniProt: C1MK81
LinkDB
Position
Unknown
AA seq 207 aa
PLIRTLLGIDAEFVALAPAVTSLDACGNEVVVQAARLGLARVSVVRGDAAIERRLVPIID
DYIRAVEPVHDYLTRFSGLIPGDLDPNTSGHHITKLKHAYLKLRYLVDVGCVFVGHGLKQ
DFKMINITVPPAQIVDTVELFHFKRQRKLSLRFLASVLLDLDIQATTHDSIEDARVAIRL
YEKYLDLNEIPGAFQAKLLEIYRHGKQ
NT seq 621 nt   +upstreamnt  +downstreamnt
ccactcatcaggacgctgctcggcatcgacgcggagttcgtcgcgctcgcgcccgcggtg
acgtcgctcgacgcgtgcgggaacgaggtcgtcgtccaggccgcgcgtctgggcctcgcg
cgcgtcagcgtcgtccgaggcgacgccgcgattgagaggcgtctcgtgccgataatcgac
gattacatccgcgcggttgagcccgtgcacgactacctcacgaggttcagcggtctcatc
ccgggggatctggacccgaacacgtccgggcaccacatcacgaagctgaagcacgcgtac
ttgaagctcaggtacctcgtcgacgtcgggtgcgtgttcgtcgggcacgggctgaaacaa
gacttcaagatgatcaacatcacggtcccgcccgcgcagatcgtcgacaccgtggagctg
ttccacttcaagcggcagcgaaagctctcgctgaggtttctcgcgagcgtgcttctggac
ttggacattcaggcaacgacgcacgactcaatagaagacgcgcgggtcgcgatcaggctg
tacgagaagtacttggacctgaacgagatacccggggcgttccaagcgaaactgttggag
atttaccggcacgggaagcag

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