Micromonas pusilla: MICPUCDRAFT_65178
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Entry
MICPUCDRAFT_65178 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mpp
Micromonas pusilla
Pathway
mpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUCDRAFT_65178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_65178
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MICPUCDRAFT_65178
mRNA degradation factors
3'-5' decay
Pan complex
MICPUCDRAFT_65178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Med26
CvfB_1st
Motif
Other DBs
NCBI-GeneID:
9681815
NCBI-ProteinID:
XP_003056204
JGI:
65178
UniProt:
C1MLQ4
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MKCHESVSSSKLSKQPPNKSLPFAPGGGFNSGDSDAFEATQQAGYSSSLNSHMVTPSITS
LDAPFIPRASISANAAPFIPGFNASSAPEGHPQRNAALPINGDFSLGLSELSATTIQSED
SLTDRPETSSYPGPFNMHNGVNIASVQNRVKDVLSSGTSEHDLLSASFLSKELLTPPQRH
GRVQHGHAVPSFQGGGQLPRVINEYHSLVPIGQKDVTNNSISSRSRLGIVKGVSFVDGKE
YVIRQIQHIYPSPEVSAKAKEVVNNWSSLVNHPNIAAIRASFVSADNGVPALYLSYDYHV
TAVSLKSLHCSNEGCKAATEPQLWSYATQLCSVLRSIHRCGLSAGGAVSLKPSKILLCCD
GQSNHDSGVVVRQRLRIAAVGLVDALYPNKNRTADTSTSQRRRRDDLIAVGQLLAVLACG
PSQVTSSDVIALAQKFCSKALGQVISDLAFGHISDSKMLSQLLAPAAFDALHAERIINDQ
FRVEFVKEVENGRLLRILTKLAFVNERPSGRLDTNWAETGDRYILKLFRDYLFHQDNEDG
SPILDWGHVFDSLNKVDIGVPEKVILLSRDELSMLVVSYADIKACIAGAYADLIKAS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgccatgaaagcgtttcctcatctaaattatcgaaacagccaccaaataaatct
ttaccttttgcgcccggaggtggattcaacagtggcgatagtgacgccttcgaggctaca
caacaagctggctacagtagctctcttaattctcatatggtcactccgtcgataacgtct
cttgatgctcccttcattcccagggcgtccatcagcgccaacgctgccccattcatccct
gggtttaacgctagtagcgctccggaaggtcacccccagcgaaacgctgcacttcctatt
aatggcgacttttcacttggtctctctgaactgtcggcaacgacgattcaatcggaagat
agtttgactgatcgtcccgaaacaagttcataccctggtcctttcaatatgcataatgga
gtcaacattgcttctgtacagaatagagtgaaagacgtgctgtcttcagggacatctgaa
cacgacctgctctcggccagctttctttccaaggaacttctaactccaccccaacgacat
gggcgcgttcagcacggccacgcggtgcctagtttccagggagggggacaacttccaagg
gtgattaatgaataccattcactggtgcccatagggcaaaaggatgtgacgaataactcg
atatcgtcaaggtcacgattagggatagtgaaaggcgtaagctttgtagatgggaaggag
tatgtcattcggcagattcaacatatctacccaagtccagaggtcagtgcaaaggcaaag
gaagtggttaataactggtcaagtttggtgaaccatccgaacattgcagcgatccgtgct
agttttgtaagtgcagataacggggtgccagcgttatatctttcatatgattatcatgtg
accgctgtctcactcaagagtttgcactgttctaacgagggttgcaaagctgccactgag
ccacaactatggtcatatgcaactcagctttgttctgttttacggagtattcaccggtgc
ggtttatcagctggaggtgctgtctctctgaaaccaagtaaaattcttctctgttgtgat
gggcagtccaaccacgacagcggagtggttgtcaggcaacgcttacgaatagcagctgtt
ggtcttgtagatgccctctatccaaataagaatagaactgctgacacaagcacgtctcaa
cgtcgtcgaagagatgatctaattgctgtcgggcagcttcttgctgtgcttgcatgcggt
ccctcccaggtgacttcctcagatgtaattgctcttgcgcaaaagttctgctctaaggca
cttggacaagttatttctgaccttgcgttcggccacatttctgacagtaagatgctcagc
cagctactggcaccagcagctttcgatgccttacatgctgaacggatcatcaacgaccaa
tttagagtggagtttgtgaaagaagttgaaaacggacgacttcttcgcattctcaccaag
ttagcatttgtgaacgagcgaccgtccggcagattggataccaattgggctgaaactgga
gacaggtatattttaaagctttttcgtgattatttatttcatcaagataatgaagacggt
tcacccattctagactggggtcacgtattcgattccctgaataaagtagacatcggtgtt
ccagaaaaagtgatcctcctttcacgcgatgagttgtcaatgctagttgtcagctacgca
gatattaaggcttgcattgcaggggcatatgccgacctcattaaagcttcttaa
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