Micromonas pusilla: MICPUCDRAFT_67350
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Entry
MICPUCDRAFT_67350 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mpp
Micromonas pusilla
Pathway
mpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUCDRAFT_67350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_67350
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MICPUCDRAFT_67350
mRNA degradation factors
5'-3' decay
Decapping complex
MICPUCDRAFT_67350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
9683184
NCBI-ProteinID:
XP_003058116
JGI:
67350
UniProt:
C1MQF0
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MGGGFFGASDGADMEELGGDLEDDPTEFEGAIEEVDIPSTRDEELLGGIFGATLSIASRD
VNSYVKPKPALLTPQDLMGAAAQPPGGPPSAFARQQAAFEAERAAFQRQMAQGGPPMGPP
AGSAPPMPPPGMLRNIGPPPPGMAPRGPPGAGAGMGMGMGMGAGMGAGAGVPPPGMPPPM
GPPPGMMGGNGAFPPLGSHPPPPGMRGGPPPPHFPPPHHGGRGRHHHDQRFPPPAPTHGG
GGGGRRGDVPEWADGSIVGGGGGDIPGMPGVPMGPNDDDAFGPGSGSFGGGGGTRQGGGR
GGRGGGRHGHNQRHNHRNRSAKLMTSDEIEQILRIQWAATHPLDRAAYDHDYYYQCWLHS
NNRAKLKEPFAPSELRELAPQAKEARAPTAFVTLDGLGRVPFSNLRAPKPLLDVSGKGEV
DGGAGREADENQAGGRRLEQEPLLAARIMIEDGMCLLLDVDDIDRQVEEGVAAEAPAAMA
RRRDFLLEGLAGTLRVPATPVLNAQARKRGDSDAVFERIATLHKGRVMLAKLLPRLRSGC
SAAASLVWAVMRHSPTLLKEGEKAAVAAAAAAGNEASANNSAAELAKETAVAMSNLSYAA
TSSAIEALASAAMAADAAGSLPSFAAASGPGAGMASLARAVLEQGSRLGILGADYDASPE
WSDCFTTLFNILDAHLATLEKYHVAAKGGEKKLAASIAERAGAEKLELPRDLLRACVPHC
TAEQRETIRVRIQSCQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggcttcttcggcgcgagcgacggcgcggacatggaagagctcgggggcgat
ctcgaggacgacccgacggaattcgaaggcgcgatcgaggaggtggacatcccgtcgacg
cgcgacgaggaactcctcggcggcatcttcggcgcgacgttatccatcgcatcgcgcgac
gtcaactcatacgtcaagccgaagccggcgctgctgacgccgcaggatctgatgggcgcg
gcagcgcagccgccgggcgggcctccctccgccttcgcgcggcagcaagccgcgttcgaa
gcggagagagccgcgttccagcgtcagatggcgcagggcgggccgccgatgggcccgccc
gcgggaagcgcgccgccgatgccgccgccggggatgctgcgtaacatcggcccgccgccg
cccgggatggcgccgagggggccgcccggcgcgggcgcgggaatgggaatgggaatggga
atgggcgcgggaatgggcgcgggcgcgggcgtgccgcccccggggatgccgccgccgatg
ggcccgccgccggggatgatgggtgggaacggcgcgttcccgccgctcgggtcgcatccc
ccgccgccggggatgcgcggcggccccccgccgccgcacttcccgccgccccaccacgga
ggacgcggacgccatcaccacgaccagcggttcccgccccccgcgccgacgcacggcggc
ggcggcggcggacgacgcggggacgtcccggagtgggcggacggatccatcgtgggcggc
ggcggcggcgacatccccgggatgcccggcgtgccgatggggccgaacgacgacgacgcc
ttcggccccggttccggcagctttggcggcggcggcgggacgcgacagggcggcggccgc
ggcggccgcggcggaggcagacacgggcacaaccagcgccacaaccatcgcaaccgcagc
gcgaagctcatgacctcggacgagatcgaacagatcctccggattcagtgggcggcgacg
cacccgctcgaccgcgccgcgtacgaccacgactactactaccagtgctggctccactcc
aacaaccgcgcgaagctcaaggagccgttcgcgccgtcggagctgcgagagctcgcgccg
caggcgaaagaggcgagggcgccgaccgcgttcgtgacgttggacggcctcggccgcgtg
ccgttttcaaacttgcgcgcgcccaaaccgcttctggacgtcagcggcaaaggcgaagtc
gacggcggcgccggacgcgaggcggacgagaaccaagcgggcggcagacggctcgaacag
gagcctctgctcgccgcgcggatcatgatcgaggacgggatgtgcctcctgctcgacgtg
gacgacatcgatcggcaggtggaggagggcgtcgccgcggaggcgcccgcggcgatggcg
cggcggcgagactttctcttggagggcctcgcggggacgctccgcgttcccgcgacgccg
gtcctgaacgcgcaagcgcggaagcgcggcgactccgacgccgtgttcgagcgcatcgcg
acgctgcacaagggcagggtcatgctcgcgaagctcttgccgcggctgcggagcgggtgc
tccgcggcggcgtctctcgtctgggcggtgatgcgtcactcgccgacgctgttgaaggag
ggcgagaaagccgcggtcgccgccgccgccgccgccgggaacgaggcgtccgcgaacaac
agcgccgccgagctggcgaaggagaccgcggtcgcgatgtcgaacttatcctacgccgcg
acgtcgtccgcgatcgaggcgctcgcgtcggcggcgatggccgcggacgccgcggggtcg
ctgccgtcgttcgccgccgcgtcgggacccggcgccgggatggcgtcgctcgcgcgcgcg
gtgctggagcaaggcagcaggctcggcatcctcggcgcggactacgacgcctcgccggag
tggtccgactgcttcacgacgttgtttaacatcctcgacgcgcacctcgcgacgctcgag
aagtaccacgtcgccgccaagggcggggagaagaagctcgcggcgtccatcgcggagcgc
gcgggcgcggagaagctggagctgccgcgcgatttgctccgcgcgtgcgtgccgcactgc
accgcggagcagcgggagacgatccgcgtccggatccaatcgtgccagtga
DBGET
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