KEGG   Micromonas pusilla: MICPUCDRAFT_68614
Entry
MICPUCDRAFT_68614 CDS       T02696                                 
Name
(RefSeq) 3' exoribonuclease
  KO
K12586  exosome complex component RRP43
Organism
mpp  Micromonas pusilla
Pathway
mpp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUCDRAFT_68614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_68614
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MICPUCDRAFT_68614
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 9688031
NCBI-ProteinID: XP_003062358
JGI: 68614
UniProt: C1N3D3
LinkDB
Position
Unknown
AA seq 301 aa
MEAAAYKRLYPHEYYRKFLAEETRPDGRPLARARDVSVANGVVTSADGSALVKIGRTTAL
AAAKLEPAPPEPTAPDVGVVEVTVELPPMCAASARPGRPTEESQRCARRIEDVLRDANVV
DLRKLCIKRGVYAWRVCVDVYVLDHDGGILDAALCAVVGALKDAKVPRVDVDDRGKLVWG
GGERERRPGDADADADANGDGDASTSAAACVVDVASHPLSLTIGQYDGKLVVDPNFEEEA
LMESVVSVVMREDGDLVCVSKPGGTREASESTLIKCIAAARLRYPGCKKAFDDAFDAVEV
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atggaggcggcggcgtacaagcggctgtacccgcacgagtactaccgcaagttcctcgcg
gaggagacgcgcccggacggccgcccgctcgcgcgcgcgcgcgacgtctccgtcgcgaac
ggcgtcgtgacgtccgcggacggcagcgcgctcgtgaagatcggacgcacgaccgcgctc
gccgcggcgaagctcgagccggcgccgccggagccgaccgcgccggacgtcggcgtcgtc
gaggtcaccgtggagctgccgccgatgtgcgcggcgagcgcgcggccggggcggccgacg
gaggagtcgcagcgatgcgcgcgacgaatcgaagacgtcctgcgcgacgcgaacgtcgtg
gaccttcgcaagctgtgcatcaagcgcggcgtctacgcgtggcgggtctgcgtcgacgtg
tacgtgctcgatcacgacggcggcatcttagacgccgccctgtgcgcggtcgtcggcgcg
ctgaaagacgcgaaggtgccgcgcgtggacgtggacgaccgagggaagctcgtctggggc
ggcggcgagcgcgaacgccgacccggcgacgccgacgccgacgcggacgcgaacggcgac
ggcgacgcgtcgacgagcgcggcggcgtgcgtcgtggacgtcgcgtcgcacccgctgtcg
ctgacgatcgggcagtacgacgggaagctcgtcgtggacccgaacttcgaggaggaggcg
ctgatggagtcggtcgtgagcgtcgtgatgcgagaagacggagacctcgtgtgcgtgtcc
aagcccggggggacgcgagaggcgagcgagagcacgctgatcaagtgcatcgccgccgcg
cggttgcggtacccggggtgtaagaaagcgttcgacgacgccttcgacgcggtggaggta
tcgtag

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