Entry
Name
(RefSeq) 3' exoribonuclease
KO
K12586 exosome complex component RRP43
Organism
Pathway
Brite
KEGG Orthology (KO) [BR:mpp00001 ]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUCDRAFT_68614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mpp03019 ]
MICPUCDRAFT_68614
Messenger RNA biogenesis [BR:mpp03019 ]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MICPUCDRAFT_68614
BRITE hierarchy
SSDB
Ortholog Paralog GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
Unknown
AA seq
301 aa AA seq DB search
MEAAAYKRLYPHEYYRKFLAEETRPDGRPLARARDVSVANGVVTSADGSALVKIGRTTAL
AAAKLEPAPPEPTAPDVGVVEVTVELPPMCAASARPGRPTEESQRCARRIEDVLRDANVV
DLRKLCIKRGVYAWRVCVDVYVLDHDGGILDAALCAVVGALKDAKVPRVDVDDRGKLVWG
GGERERRPGDADADADANGDGDASTSAAACVVDVASHPLSLTIGQYDGKLVVDPNFEEEA
LMESVVSVVMREDGDLVCVSKPGGTREASESTLIKCIAAARLRYPGCKKAFDDAFDAVEV
S
NT seq
906 nt NT seq +upstream nt +downstream nt
atggaggcggcggcgtacaagcggctgtacccgcacgagtactaccgcaagttcctcgcg
gaggagacgcgcccggacggccgcccgctcgcgcgcgcgcgcgacgtctccgtcgcgaac
ggcgtcgtgacgtccgcggacggcagcgcgctcgtgaagatcggacgcacgaccgcgctc
gccgcggcgaagctcgagccggcgccgccggagccgaccgcgccggacgtcggcgtcgtc
gaggtcaccgtggagctgccgccgatgtgcgcggcgagcgcgcggccggggcggccgacg
gaggagtcgcagcgatgcgcgcgacgaatcgaagacgtcctgcgcgacgcgaacgtcgtg
gaccttcgcaagctgtgcatcaagcgcggcgtctacgcgtggcgggtctgcgtcgacgtg
tacgtgctcgatcacgacggcggcatcttagacgccgccctgtgcgcggtcgtcggcgcg
ctgaaagacgcgaaggtgccgcgcgtggacgtggacgaccgagggaagctcgtctggggc
ggcggcgagcgcgaacgccgacccggcgacgccgacgccgacgcggacgcgaacggcgac
ggcgacgcgtcgacgagcgcggcggcgtgcgtcgtggacgtcgcgtcgcacccgctgtcg
ctgacgatcgggcagtacgacgggaagctcgtcgtggacccgaacttcgaggaggaggcg
ctgatggagtcggtcgtgagcgtcgtgatgcgagaagacggagacctcgtgtgcgtgtcc
aagcccggggggacgcgagaggcgagcgagagcacgctgatcaagtgcatcgccgccgcg
cggttgcggtacccggggtgtaagaaagcgttcgacgacgccttcgacgcggtggaggta
tcgtag