Marinobacter psychrophilus: ABA45_03330
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Entry
ABA45_03330 CDS
T03980
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpq
Marinobacter psychrophilus
Pathway
mpq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABA45_03330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpq03021
]
ABA45_03330
03400 DNA repair and recombination proteins [BR:
mpq03400
]
ABA45_03330
Enzymes [BR:
mpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABA45_03330
Transcription machinery [BR:
mpq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABA45_03330
DNA repair and recombination proteins [BR:
mpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABA45_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF22
Motif
Other DBs
NCBI-ProteinID:
AKO51573
UniProt:
A0A0H4I158
LinkDB
All DBs
Position
734092..735096
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AA seq
334 aa
AA seq
DB search
MQRSVHELLTPRTIDVKESGSTRAKVTLEPLERGFGHTLGSALRRILLSSMPGCAVTEAQ
IDGVLHEYSAIEGVQEDVIEILLNLKGVAVKMHGRDDAELMLSKKGPGVVTAGDIKLDHD
VEIANPEHIICHLSENGEVNMRLSIARGRGYEPADQRGLDEDETRAIGRLQLDATFSPVR
RVAYSVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDHEKEPE
RVEEEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLRGDDRVLGG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtacatgagttattgacacctcgtaccattgacgtgaaggaatccggt
tccacgcgtgccaaggtgaccttggagcctcttgaaagaggtttcggccacactctgggc
agtgcgttacgccgtattctcttgtcttcgatgccgggctgcgctgttaccgaagcgcag
attgacggtgtgttgcacgagtacagcgccattgaaggtgtccaggaagacgtcatagag
attcttttgaatcttaagggcgtcgctgtaaaaatgcacggccgtgacgatgccgagctt
atgctcagcaagaagggtccgggtgttgttacagccggagatataaagttggatcatgat
gtcgagatcgccaatccagaacacattatctgtcacctgagcgagaatggtgaagttaac
atgcgtctgagcattgcccgcggtcgcggctatgagcctgctgatcagcgcggtctggat
gaggacgaaactcgtgccatcggacgtctgcagttggatgctacgttcagcccggttcga
cgcgttgcttattctgtggaaagtgcacgggtagagcagcgtaccgacctcgacaagctg
gttattgatctggagactaatggtactatcgatccggaagaagcaattcgccgggccgct
actattcttcagcagcaattggccgtgtttgttgattttgatcatgaaaaagaaccagag
cgcgtggaggaagaggaagaaattgatccgattctgctgcgcccggttgatgatctagag
ctgacagtacgttccgccaactgcttgaaggctgagaacatttactacatcggcgatttg
attcagcgcacagaagttgagctgttgaagacgcctaacctgggtaaaaagtcgctgaca
gagatcaaggacgtattagcgtcccgtggtttgtctctgggaatgcgtcttgataactgg
ccgccggcaagccttcgtggtgatgaccgggttctgggcggttaa
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