Marinobacter psychrophilus: ABA45_07195
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Entry
ABA45_07195 CDS
T03980
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mpq
Marinobacter psychrophilus
Brite
KEGG Orthology (KO) [BR:
mpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpq03032
]
ABA45_07195
03036 Chromosome and associated proteins [BR:
mpq03036
]
ABA45_07195
03400 DNA repair and recombination proteins [BR:
mpq03400
]
ABA45_07195
DNA replication proteins [BR:
mpq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABA45_07195
Chromosome and associated proteins [BR:
mpq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ABA45_07195
DNA repair and recombination proteins [BR:
mpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ABA45_07195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HTH_40
HU-CCDC81_bac_1
DUF5666
Motif
Other DBs
NCBI-ProteinID:
AKO52241
UniProt:
A0A0H4HZW5
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All DBs
Position
1621100..1621396
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AA seq
98 aa
AA seq
DB search
MTKSELVELIASKQTQLSVKDVELAVKTIIEHMSRSLADGQRIEIRGFGSFSLHHRAARV
GRNPKSGEAVQLPAKFVPHFKPGKELREQVNESLKQGF
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcggaactggttgagttaattgcttcaaagcagacgcagttgtcggtaaaa
gacgtggaactggcggtaaaaaccatcatcgaacacatgtctcgatctctggcagatggc
cagcgcatcgaaattcgcggttttggcagtttttccctccaccatcgtgccgcgcgagta
gggcgtaacccgaaatccggtgaagcagtacagttaccggcaaaatttgtgccccacttc
aaacccggcaaagaactgcgcgaacaggtcaacgagagcttgaaacagggtttctga
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