Microcystis protocystis: ACQY1X_14365
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Entry
ACQY1X_14365 CDS
T11429
Name
(GenBank) ribonuclease R family protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mprc Microcystis protocystis
Pathway
mprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQY1X_14365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mprc03019
]
ACQY1X_14365
03016 Transfer RNA biogenesis [BR:
mprc03016
]
ACQY1X_14365
Enzymes [BR:
mprc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ACQY1X_14365
Messenger RNA biogenesis [BR:
mprc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACQY1X_14365
Transfer RNA biogenesis [BR:
mprc03016
]
Prokaryotic type
tRNA degradation factors
ACQY1X_14365
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XTX14174
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Position
2979708..2981966
Genome browser
AA seq
752 aa
AA seq
DB search
MDFSIATLLSHLSDDKLATGKLLEKKLGCEDDPESCEKLQVILDALERLGMVVKERGRYR
RVIEENIVEAKLRCSSKEFCFAIQDIEDADDIYVSKNHLSNAWNGDRVLVKIIREGTRRR
SPEGEVRLILERANPSLLAQVKQENEQFVAVPLDDRLKFTLNLLENGQNLLENIDHLVHV
SVLRYPLGEMPPIGKVTRVLGSTAEAAADTDIVSCKHDLPHNFPPEALEIADNLADFFDS
GEKEQLRDLTQLFTFTIEDDTPLDYPPIIENAFSLEKINQNRWQVAIHISDVTRYIERGG
LLDKVAKKRGTAVYLGEKVLPLVPAALASRCSLSPQEQRPAISILVTLDDKGELVEYEIT
RSLIQVDQHFTYQQVRDLLSEEDSAAAPTDTVETLKDLFFSVCPTLKSQRLQRGSFDIQL
DKISPYKDEGRGGTVLASNNLPARSLLTEVAILASKVVAEHLQALKLPCIYCGQSEPDWD
ELEDLLKLANNLGAELNLTAEEEIKPNDYQNLTRTFSASSSVKVLNYLLQETLKLVRYSS
HPLPHFGLAYPSNYTHCLSPLQRYADLWVQRVLKLLLTEGKDRRSKIVKVGVNLGSNSCH
GQIHWNILPSQIQEELEEESHLIVSHLNDRSKIAEDAEKDLEGLKKAEKMKEKMGQVFRG
LITGVQSYGFFVEISDLLVEGLVHVSSLKDDWYEYRARHSCLVGRKNRVAYRLGDEVEVE
IKDVDYYRQQIDLVTVSGGSSASYDDLEEDQL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcgatcgccacactcctctctcatcttagtgatgataaattagctacgggt
aaacttctcgaaaaaaaattaggctgcgaagacgatcccgaaagctgcgaaaaattgcaa
gtgattctcgatgctttggaacgtctgggaatggttgtcaaagaacgggggcgctatcgt
cgtgtgatcgaggaaaatatcgtagaagcaaagctgcgctgttccagtaaagaattttgc
tttgctatccaagatatcgaagatgctgatgacatctacgtctcgaaaaatcatctcagt
aacgcttggaatggcgatcgagttttagtcaaaatcatccgcgagggaacccgtcgtcgt
tccccagaaggagaggtgagattaattctcgaacgagctaatccttcgcttctagcgcaa
gtaaaacaggaaaatgagcagtttgtagcggttcccctggatgatcgtctgaaatttacc
cttaatctcctcgaaaatggtcaaaatctcctagaaaacatcgatcacctcgttcatgtt
tccgtcctccgttatcccctaggggaaatgcctcccatcggtaaagttactcgcgttctc
ggttccacggccgaggccgctgccgacacggatatcgtctcctgtaaacacgatctaccc
cataattttccgccagaagccctcgaaattgccgataatttagcggatttcttcgatagt
ggcgaaaaagaacaactgcgagatttaacccaactcttcacctttaccatcgaagatgac
acccctctagattatcccccaatcattgaaaatgccttttctttagagaaaatcaaccaa
aatcgctggcaagtcgccattcatatcagcgatgtcacccgttacattgaacggggcgga
ttattggataaagttgccaaaaaacggggaacagccgtctatttaggcgaaaaagtgctg
ccattagtcccggctgcccttgccagtcgttgttccctgtcaccccaagaacagcgcccc
gctatttctatcctcgtcaccctcgatgacaagggggagctagtggagtacgaaatcacc
cgcagcctcatccaagtggatcaacattttacctatcaacaggtgcgcgatctgctcagt
gaagaagatagcgcagctgcccccaccgataccgttgaaaccctgaaagatttatttttc
agcgtttgccccaccctaaaatcccaacgtctgcagcggggtagttttgatattcaatta
gacaaaatctctccctacaaagacgaaggacggggggggactgttctcgcttctaataat
ttacctgcccgttctttactgacagaagtggcaattttagccagcaaagtcgtcgctgaa
catttacaggccttaaaattgccctgtatctactgtggacaatcggaaccagattgggat
gaattggaggatttactcaaattggccaataatttaggggcagaattaaatttaactgcc
gaggaggagattaaacccaatgactatcaaaatctcacccgcactttttccgcttcctca
tcggtgaaagtcctcaattatctcctgcaagaaactctcaaattagttagatatagtagt
catcctctgccccattttggtttggcctatcctagcaattatacccactgtctctcaccc
ctacaaagatatgccgatctttgggtacaacgggtgttaaaactcctattaaccgagggg
aaagatcgccgcagcaaaatcgtcaaagtcggggttaatttgggcagtaatagctgtcat
ggacagattcattggaatattctcccaagtcaaattcaggaggagttggaagaagaaagc
catctaattgtttcccatctcaatgatcgctcaaaaattgctgaagatgcggaaaaagac
ctagaaggattgaaaaaagccgagaaaatgaaagaaaaaatgggtcaagtttttcgcggc
ttaattaccggtgtacaatcctatggtttcttcgtggaaatttccgatttattagtggaa
gggttggtccatgtttcttctctcaaggatgattggtacgaatatcgcgctcgtcatagc
tgtttggtaggacggaaaaatcgcgttgcctatcgtctcggtgatgaggtagaagtggag
ataaaagatgtagactattatcgtcagcaaatcgatctagttacggttagcggtggcagt
tcagcaagttatgacgacttagaagaagatcaattatga
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