Marinomonas profundi: J8N69_00735
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Entry
J8N69_00735 CDS
T07858
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mprf
Marinomonas profundi
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mprf03021
]
J8N69_00735 (rapA)
Transcription machinery [BR:
mprf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
J8N69_00735 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Helicase_C
SNF2-rel_dom
ResIII
Tudor_1_RapA
DEAD
Cas3-like_C_2
Flavi_DEAD
Tudor_RapA
Motif
Other DBs
NCBI-ProteinID:
UDV03359
LinkDB
All DBs
Position
159167..161995
Genome browser
AA seq
942 aa
AA seq
DB search
MYQTGQRWSSRNEPDLGVGMIIDTQNKSFTLHFPDAEADRQYSNDQTSLVRRTLTVGDQL
HFQDETFTVLEVEEINDLIEYRISDDDDWLEESIIQFPRNDKNELDSLLALSPARRMWFD
LRRHTLEHQAANAASPVRGLMGLKAELLPHQIYLAHDIANRPKARALLCDEVGMGKTLEA
GLILHQRLLNGLCKRVLILTPTNLQHQWLVEMLRRFHQPFSLINESVYEDFMEGDDNPFE
QQPFVISPIDWASQHPKATQHMLDAEWDMVIVDEAHHLAWHPETPSIGYQVVARLAAKTE
SLLLLSATPEQTGEREHFSRLQLLDADHYHDFEHYQAQQHAFKQAAELAGALLPFSQENS
SAEALDWNAAFGTYLKEVSAKEWFQTLTTKTGAEQTEAAKEAISWLIDRHGTGREMFRNT
RAAVGGFPDRYLHSYPLDNNEFFESASHHVQPETEVADGLWEKDPRWLWLKEFLECQADK
VLVICHTADMAQWLNDQLTFAGFQSADFHEQMPLIHRDRAAAYFADDDGAQILVCSEIGS
EGRNFQFSHHIVMYDLPEHPDLLEQRIGRLDRLGQLNDVQIHVPYIKQSVQERLFNWYHH
ALNAFCRTTGSGDKVEEAFGDSLHAYLHGQDDDTDLLKEANIYHEALLKQMEEGRNRLLE
MSSCRPEQARALIDQINHQATKGLHHYIEQVTHAFNIYADCINDDPDRAAWFLRPSTDMM
LEALPGIEEEGKMLMLDRRQASQREDVAFATWEHPLITMLMDEVQGFDSGRLTSAILPIA
ALPEGTVLVESMFVIEATAHPRLKLAQSLPMTPMWQLSDSNGKFLHQQFTADKWAEKLKG
VPNRVAEQWVAALRKNLIEVLQAHQLNAQDQARPIVQAAKTAYQHRCQNEIERLIELKAF
NDTIRDQDIERLETNMQEGLTRIDEHQIRLDAIRIILTTKPE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaactggacaaagatggagtagccgcaacgagcctgatctcggcgtaggcatg
ataatagacacccaaaacaaatcttttaccttgcacttccctgatgcggaagcggatcgt
caatactcaaatgaccagaccagtcttgttcgacgcaccttaaccgtcggcgatcaactg
catttccaagatgaaaccttcacggtattggaagtagaagaaattaacgacctgatcgaa
taccgcatcagcgacgacgatgattggctagaagagtccatcattcaattcccgcgcaac
gacaagaacgagctggattcgttattggcgctgtcgcctgcgcgccgcatgtggttcgac
ctacgtcgccatacccttgaacaccaagcggccaatgcggcttcgccagtacgcggttta
atgggcttaaaagccgaattgctaccacaccaaatttatctggctcacgacattgccaat
cgccctaaagcgcgcgcgctattgtgtgacgaagtcggtatggggaaaaccctagaagcc
ggtttgatcttgcatcagcgtctcttaaatggcctttgcaaacgcgtgcttattttgaca
cccaccaacctgcaacatcagtggttggttgaaatgttacgccgcttccaccagcccttc
tcactgattaatgaatccgtgtacgaagacttcatggaaggcgacgacaacccgttcgaa
caacaacccttcgttatttcaccaatcgattgggccagccaacacccgaaagccactcaa
cacatgttggatgccgaatgggacatggtgattgtcgacgaagcccatcaccttgcgtgg
cacccagaaactcccagcattggctatcaagtagtggcacgtttagcggcgaaaaccgag
agtctgttgttgctcagtgccactccagaacaaactggcgagcgtgaacatttttctcgt
ttacaactattagatgccgatcattaccacgacttcgagcattaccaagcccagcagcat
gctttcaaacaagccgcagaactggccggggctttactaccattcagccaagaaaacagc
tcagcagaagcgcttgattggaatgcggcctttggcacttacctaaaagaagtcagcgcc
aaagaatggttccaaacactcaccaccaaaaccggcgcggagcaaaccgaagccgcaaaa
gaagccatcagctggttaatcgaccgccacggcacaggccgcgaaatgttccgcaacacc
cgtgcagcagtgggcggtttcccagatcggtatttgcattcttacccgctggacaacaat
gaattcttcgaatcagccagtcatcacgtacagcccgaaaccgaagtcgctgacggtttg
tgggaaaaagacccgcgctggctttggctaaaagaattcctcgaatgccaagcagacaag
gtactggtgatttgtcataccgccgacatggcacaatggctaaacgaccaactaaccttc
gcaggtttccaaagcgcggatttccatgaacaaatgccacttatccaccgtgaccgagcg
gcagcctacttcgccgacgatgacggcgcgcaaattctagtgtgttctgaaatcggcagt
gaaggccgtaacttccagtttagccatcacatcgtcatgtacgatctaccagaacaccca
gatttactcgaacagcgtattggtcgtctggatcgtctaggccagctcaatgacgtgcaa
attcatgtaccttacatcaagcaaagcgtgcaagaacgcctgttcaactggtatcaccac
gccctaaacgccttttgccgtaccacaggttctggcgacaaagtggaagaagcctttggt
gacagcttacatgcctacttgcatggtcaagacgacgacacagacctgctaaaagaagcc
aatatctaccatgaagcactgctaaaacaaatggaagaaggccgcaaccgcttgctagaa
atgagttcgtgccgcccagaacaagcccgtgcgctaatcgaccagattaaccatcaagca
acaaaaggcttacaccactacattgagcaagtcacccatgcgtttaacatttacgcagac
tgcattaatgacgacccagatcgtgccgcttggttcttacgcccttctaccgacatgatg
ctcgaagccctgccaggcatcgaagaagaaggcaaaatgctcatgcttgatcgccgtcaa
gccagccagcgtgaagacgtggccttcgctacatgggaacacccattaatcaccatgctt
atggacgaagtacaaggctttgactccggcagactgacctcggctatcttgcctattgca
gcgctaccagaaggcaccgtcttggtggaaagcatgttcgtcatcgaagccaccgctcac
ccacgcttgaaattggcgcaatccctaccaatgacccccatgtggcagttgtccgactcc
aacggtaaattccttcaccagcaatttaccgccgacaaatgggccgaaaaactcaaaggc
gtaccaaaccgagtggcggaacaatgggtggcagctttacgcaaaaaccttattgaagtg
ctgcaagcccaccagctaaacgcccaagaccaagctcgcccgattgtgcaagcggcgaaa
accgcttaccagcaccgctgccaaaatgaaatcgaacgattgattgaattgaaagctttc
aacgacaccattcgtgaccaagacatagagcgtctagaaaccaacatgcaagaaggtttg
actcgcatcgacgagcaccaaatccgcttggatgcgattcgtattattctaacgactaag
ccggaataa
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