Marinomonas profundi: J8N69_01830
Help
Entry
J8N69_01830 CDS
T07858
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mprf
Marinomonas profundi
Pathway
mprf03030
DNA replication
mprf03430
Mismatch repair
mprf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J8N69_01830 (dnaE)
03430 Mismatch repair
J8N69_01830 (dnaE)
03440 Homologous recombination
J8N69_01830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mprf03032
]
J8N69_01830 (dnaE)
03400 DNA repair and recombination proteins [BR:
mprf03400
]
J8N69_01830 (dnaE)
Enzymes [BR:
mprf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J8N69_01830 (dnaE)
DNA replication proteins [BR:
mprf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J8N69_01830 (dnaE)
DNA repair and recombination proteins [BR:
mprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J8N69_01830 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
DUF655
NDUFC2_fungi
Motif
Other DBs
NCBI-ProteinID:
UDV03551
LinkDB
All DBs
Position
complement(406211..409687)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSTSFIHLRVHTEFSLVDGLVKIKGLLGTTEFMSMPAVAITDENNLCGFVRFYKGAMEKG
IKPICGADVVVAEDEEVDSRYRFTLLATSNKGYKNIIAIISKGYQLGQVEGRPIVQRDWI
EAHSEDVIALSGAGFGDVGYLLQKGRQEQAKSRIAHWMSVFPDRFYIELQRTSRAGEESY
IHAVVPLASELDCPVVATNDVRFLKRENFEAHEARVCIHDGVTLDDPRRKRRYSEEQYFK
TAEEMAVLFQDIPEALENTVEIAKRCSVDVLLGKYFLPDYPVPEGMTMEAFFSKLSYDGL
VERFDFLTRKYGERIEKRRQEYWERLDFELTIINQMGFPGYFLIVMDFIQWAKDNDIPVG
PGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDNRDRVIDYVS
RTYGRDAVSQIITFGAMAAKAVVRDVARVQGKPYSLGDKLSKLIPFEIGMTLKKALEEEP
ALPEFLAGDEDAAEVMEMAISLEGVVRNFGKHAGGVVIAPTKLIDFAPLYCEEDGSGLVT
QYDKNDVEEAGLVKFDFLGLKTLTVVDWAVKNINTINELKGKPPLDISLIDLEDHTTYDL
LKRAETTAVFQLESRGMKELIKKLLPSRFEDIIALVALYRPGPLGSGMVDDFINRKHGRA
ELAFPHPDYQHQDLIPVLEPTYGIILYQEQVMQIAQVLAKFSLGGADLLRRAMGKKKAEV
MAEQRLIFMEGALKNNVDKDLSGNIFDLMEKFAGYGFNKSHSAAYALVSYQTAWLKNHYP
APFMAAVLSADMQNTDKIVIFIEECRSMKLALELPNVNESVFKFTVNPKGAIVYGLGAIK
GVGEGPIDAIVEARKEGPFEHIFDFCQRVGRKVNKRVMEALVRSGAFDTIGPNRATLFAC
IDEALKRAVQDAKNQDAGMMDLFGIAVEENTQDAYKEIGIQHEWPPRQRLDGEKDTLGLY
VTGHPIDEYEKEIRRFVRSKIVDLQPKRGDTQIMAGLIVDLRITKSKKGGNIAFVTLDDR
SARIEVTVFPDSYDTFKNVIVKDEVVVVEGEITVDEFRGGQKVIARNILDIAQARVRYVE
ALRITWTSETVTPTEIQALANSMESYRGDGCDVVIGFDTPQACGDIRLGSGWKVRPDDEL
IHQLQKQYGKQNVQLVYT
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacatcgtttatacatctacgagtccataccgagttttccttggttgatggcttg
gtgaaaatcaaaggcttgcttggtactaccgagtttatgtctatgccagccgtggccatt
accgacgaaaacaacctctgtggttttgtgcgtttttacaaaggggcgatggagaaaggc
attaaaccgatttgcggggcagatgttgtcgttgccgaagacgaggaggtggattcgcgt
tatcgctttaccttgttggcgacatctaacaagggctacaaaaatattatcgccattatt
tcgaagggctatcaattaggtcaagtagaaggtcgtcctattgtgcagcgagactggata
gaggcgcacagtgaagatgtgattgctttgtctggcgcaggttttggtgatgttggttat
ttgctgcaaaaaggtcggcaagaacaggccaaaagccgaatagcgcattggatgtctgtc
ttccctgatcgcttttatattgaactgcaacgcaccagtcgtgctggcgaagaaagctat
atacacgcggttgtgccattggccagtgaattagattgccccgtagtggcgaccaatgat
gtgcgttttttaaagcgagagaactttgaagcgcatgaagcgcgtgtctgtattcatgat
ggcgtgaccttagatgacccgcgccgtaagcgtcgctattcggaagaacagtatttcaaa
acggcagaagaaatggccgtgctttttcaagatatccctgaggcgcttgaaaacaccgta
gaaatcgccaagcgctgcagtgttgacgtgttgctcggtaaatatttcttgccagattat
cctgtgccagaaggcatgacgatggaagcgttttttagtaagttgtcttatgacggccta
gtagagcgttttgattttttgaccagaaagtatggcgagcgaattgaaaagcggcgtcag
gagtattgggagcgtttggattttgagttaaccattatcaatcaaatggggtttcccggt
tacttcttaatcgtgatggattttattcagtgggccaaagacaatgatattcctgttggt
cctgggcgaggctctggtgccggttctttggtggcttatgcccttaaaattaccgatcta
gatccgctcgaatacgatttactgtttgaacgattcttgaacccagagcgggtatccatg
ccggactttgatatcgatttttgcatggataatcgtgaccgagtgattgactatgtgtct
cgcacttatgggcgagacgcggtgtcgcagattattacctttggtgccatggcagcaaaa
gccgtggtgcgcgatgttgcaagggtgcaaggcaagccctacagtttaggcgataaatta
tcgaagctgattccttttgaaatcggcatgacgcttaaaaaagccttggaagaagagcca
gcattaccagaatttttagccggagacgaagacgctgccgaagtcatggaaatggcgatt
tcgttagaaggcgtagtgcgtaactttggtaaacacgctgggggggtcgtgatcgccccc
actaaactgattgattttgccccactttattgtgaggaagatggatcgggtttggtgact
cagtacgataaaaacgacgttgaagaagcgggcttggttaagttcgatttcttgggtcta
aaaacgctcacggttgtggattgggcggttaaaaatatcaataccatcaatgagctgaaa
ggcaaaccgccgttagatatctctttgatagatctagaagatcataccacctacgactta
ttgaaacgtgcagaaaccaccgcggtattccagctggaatcacgtggtatgaaggagttg
attaaaaagcttttgccgtcgcgctttgaagatattatcgccttggtagccttgtatcgt
ccggggccattgggctctggcatggtggacgattttatcaatcgtaagcatggtcgcgca
gagctggcgttccctcatcccgattaccagcatcaagatttgattccagtgttggaaccc
acctacggcattatcttgtaccaagagcaggtaatgcagatcgctcaggtgttggcgaaa
ttctctcttgggggggccgatttattgcgccgtgccatgggtaagaaaaaagccgaggtc
atggctgaacaacgcttgatctttatggaaggggcactcaaaaacaatgtcgataaagat
ctgtcgggtaacatctttgacttgatggaaaaatttgccggttatgggttcaacaaatcc
cactcggccgcgtatgcgttggtttcttatcaaaccgcttggttaaaaaatcattaccct
gcgccctttatggcggcggtattgtctgccgatatgcagaacaccgataagatcgttatt
tttattgaagagtgtcgttcaatgaagttggcacttgagttgccgaacgtgaatgagtct
gtctttaaatttaccgttaatccaaaaggggccattgtttatggtcttggtgccatcaag
ggcgtgggcgaaggtccgattgacgccattgtggaagcgcgtaaagaagggccgtttgag
catatttttgacttctgtcagcgagtagggcgaaaagtgaataaacgcgtgatggaagcc
ttggtgcgttccggtgcttttgacaccataggtccgaatcgtgcgacactgtttgcctgt
atcgatgaagcgctaaaacgcgcagtgcaggatgctaaaaaccaagatgctggcatgatg
gatttattcggcattgcggtagaagaaaatacgcaggacgcctataaagaaataggaata
cagcatgaatggccaccgcgtcagcggcttgacggggaaaaagacacgttgggtttgtat
gtaacgggtcaccccattgatgagtatgaaaaagagattcgtcgctttgttcgttcaaaa
attgtggatttacagcctaagcgtggtgatacgcagatcatggcaggcttgatcgtagac
ttgcggattaccaagagcaaaaaaggtggtaacattgcctttgttacattagatgaccgt
tctgctcgtattgaggtgacggtgtttcctgatagctatgacacttttaaaaacgttatt
gtcaaagacgaagtggttgtggtggaaggggaaattaccgtcgatgaatttcgtggtggt
caaaaagtgattgctcgaaatattctcgatattgctcaggctagggttcgttatgttgag
gcattacgaattacgtggacctcagaaacggtgacacccacagaaatacaggcgctagcg
aattccatggaatcctatcgaggggatggttgtgatgtcgtaataggcttcgacacacca
caggcttgtggtgatattcggctaggaagtggttggaaagttcgtcccgatgacgaatta
attcaccaacttcagaaacaatacggtaaacaaaatgttcagttagtgtatacttag
DBGET
integrated database retrieval system
