Marinomonas profundi: J8N69_06045
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Entry
J8N69_06045 CDS
T07858
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mprf
Marinomonas profundi
Pathway
mprf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J8N69_06045 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mprf03400
]
J8N69_06045 (mutM)
Enzymes [BR:
mprf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
J8N69_06045 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J8N69_06045 (mutM)
DNA repair and recombination proteins [BR:
mprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J8N69_06045 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
K-cyclin_vir_C
DUF6208
Motif
Other DBs
NCBI-ProteinID:
UDV04310
LinkDB
All DBs
Position
complement(1293320..1294138)
Genome browser
AA seq
272 aa
AA seq
DB search
MPELPEVETTLRGIEPKLVGRSLARVDIRQPKLRWLITPELSSEMLGQEITHLSRRGKYI
GIHTSKGTLIVHLGMSGSLYFVPAETPPLFHDHVDFCFADDDVWLRYTDPRRFGAILWTT
DDWNEHALIKHLGPEPLSEAFNVDMLSARAKGRKVPIKTFIMDSKVVVGVGNIYANEALF
KAGIRPDRLAGKVSKARLARLVECIKVVLAAAIKQGGTTLKDFVGGDGKPGYFKQELAVY
GRAEKPCLVCSAPLKEIRQAQRSTVFCSQCQS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaaccacgttacgaggcattgagcccaagctagtgggg
cgttcgcttgctagggtcgatattcgtcagccaaagctgcgttggttgattacaccagag
ctaagctcagagatgctgggtcaagagatcacgcatctttctcgacgtggcaaatacatt
ggtattcatacctcaaaaggcaccttgattgttcatttaggcatgtcaggtagcttgtat
tttgtccctgccgagacgccgccgctgtttcacgatcatgtggatttttgttttgccgat
gatgacgtatggctaaggtataccgaccctcgtcgctttggtgcgattctgtggaccaca
gatgactggaacgaacatgcgctaataaagcatctggggcctgagcctttatctgaagcg
tttaatgtcgatatgttatctgcgcgtgccaaaggtcgtaaggttcccattaagaccttt
attatggacagtaaggttgtggtgggagttggcaatatttacgccaatgaggccttgttt
aaagcggggattcgtcctgatcgtttggctggtaaggttagtaaagcccgtttggcgcgt
ttggttgagtgcattaaagtggtgctggcggcggctattaaacagggcggtacgacgtta
aaagactttgttggtggtgatggtaagccaggttattttaagcaggagctggcggtttat
ggtcgagcggaaaagccttgtttagtctgtagcgctccccttaaagagatccgccaagcc
cagcgcagtacggtattttgtagccaatgccaatcttga
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