Marinomonas profundi: J8N69_06915
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Entry
J8N69_06915 CDS
T07858
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mprf
Marinomonas profundi
Pathway
mprf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J8N69_06915 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mprf03021
]
J8N69_06915 (rpoA)
03400 DNA repair and recombination proteins [BR:
mprf03400
]
J8N69_06915 (rpoA)
Enzymes [BR:
mprf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J8N69_06915 (rpoA)
Transcription machinery [BR:
mprf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J8N69_06915 (rpoA)
DNA repair and recombination proteins [BR:
mprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J8N69_06915 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UDV04476
LinkDB
All DBs
Position
complement(1483398..1484402)
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVSELLTPRNIEVQELGNCRAKVTLQPLERGFGHTLGNALRRILLSSMPGCAIVEVE
IDGVLHEYSAIEGVKEDVIEILLNLKGVAIALHGQDEATLTLSKKGPGIVTAGDIQLVAD
AEIANPDHVIAYLDDTAELTMQIKVARGRGYEPADARVAGDDETRPIGRLQLDASFSPVR
RVAYSVENARVEQRTDLDKLVLDIESNGTIDAEEAIRRAATILQQQIAVFVALESESEAP
VVEEEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLAQRGLSLGMRLENWPPASLKDDSKVLAR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgagcgaattgttaaccccacgcaacattgaagtgcaggaattgggc
aattgtcgcgctaaagttacactgcaaccgctagaacgtggttttggtcatactttgggt
aacgcgctgcgccgtattcttctgtcttcaatgccaggttgtgcgattgttgaagttgag
atcgacggtgtattacacgaatacagcgcaatcgaaggggttaaagaagatgtaattgaa
attcttcttaacctgaaaggagttgcgatcgctctacacgggcaagatgaagcaactctt
actctaagtaaaaagggtcctggtatcgtgactgctggagatattcagctagttgcagat
gcagagatcgcgaaccctgatcatgttattgcgtacttagatgatactgctgagttaact
atgcagatcaaagtcgcacgtggtcgtggttatgagcctgctgatgctcgtgttgctggc
gacgatgagactcgtccaatcggtcgcttgcagctggatgcctcattcagccctgttcgt
cgtgtggcttacagtgtcgaaaatgctcgtgtagagcaacgtacagatttagataagtta
gtcttagacatcgaatctaatggtactattgatgctgaagaagccattcgtcgcgcagcg
actattttacaacagcaaattgctgtgttcgtcgcccttgaaagcgagagcgaagcgcct
gttgtagaagaagaggatgagattgatccaattttgctacgcccggttgatgatcttgaa
ttgaccgttcgcagtgctaactgtttaaaagcagagaacatttattacatcggtgatttg
attcaacgtactgaggttgagcttcttaagacgcctaacctaggtaagaagtcgttaact
gaaatcaaagatgttttagcacagcgtggtttgtctttgggaatgcgtttagaaaactgg
ccaccagctagtttgaaagacgatagcaaagttctagctcgctag
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