Marinomonas profundi: J8N69_07295
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Entry
J8N69_07295 CDS
T07858
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mprf
Marinomonas profundi
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mprf03021
]
J8N69_07295 (rpoH)
Transcription machinery [BR:
mprf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J8N69_07295 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
UDV04541
LinkDB
All DBs
Position
complement(1555894..1556760)
Genome browser
AA seq
288 aa
AA seq
DB search
MSKALQPTDMMIPGQSLESYMQAIGRIPILTADEEKTLAERLYYQEDLEAARTLVMSHLR
FVVHIAKSYSGYGLAQGDLIQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFILK
NWRIVKVATTKAQRKMFFNLRSAKKSLSWFSNSEVESVASDLGVTPEVVRQMEGRLSSSD
MAFDASADDDDDSAFQAPSQYLEDHRSDPAMLLENGNWEEDSNQRLEVAMADLDERSRNI
LVQRWLSDAKSTLHDLADEYGVSAERIRQLEKNAMKKIRLAMGDGQFD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagctcttcagcctacagacatgatgattccaggtcagagcctagaatcctat
atgcaagctattggtagaattccgattttgacagcggatgaagaaaaaacattggccgag
cgtctttattatcaagaagatcttgaggcggcgcggaccttggttatgtcgcatctgaga
tttgttgtgcatattgcgaaaagttattctggctatggtttagcgcaaggcgatttgatt
caagaaggcaacgttggtttgatgaaagccgttaaacgtttcaacccagaagtgggtgta
cgtcttgtttcttttgcggtgcattggatcaaggccgagatccatgaatttattctgaaa
aactggcgcattgtgaaagtggccaccaccaaagcacagcgtaaaatgttttttaatttg
cgcagtgcgaaaaaatctttgtcttggttcagcaactcagaagtagaatcggtggcgagt
gatttaggggtaacgcctgaagtggtgcgtcaaatggaagggcgtttgagttcttctgat
atggcgttcgatgcgtcggctgatgacgatgatgacagcgcgtttcaagcgccctcgcag
tatttagaggatcatcgctctgacccagccatgctactggaaaacggtaattgggaagaa
gattccaatcagcgccttgaggttgctatggcggaccttgacgagcgtagccgtaatatt
ctagtgcagcgctggttgtctgatgccaagtcgaccttgcatgatttggccgatgaatat
ggcgtttcagcggagcgtattcgtcagcttgaaaagaacgcaatgaagaagattcgtctt
gcgatgggcgatggtcagtttgactga
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