Marinomonas profundi: J8N69_07750
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Entry
J8N69_07750 CDS
T07858
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mprf
Marinomonas profundi
Pathway
mprf03420
Nucleotide excision repair
mprf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J8N69_07750 (uvrD)
03430 Mismatch repair
J8N69_07750 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mprf03400
]
J8N69_07750 (uvrD)
Enzymes [BR:
mprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J8N69_07750 (uvrD)
DNA repair and recombination proteins [BR:
mprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J8N69_07750 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
J8N69_07750 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UDV04626
LinkDB
All DBs
Position
complement(1656313..1658526)
Genome browser
AA seq
737 aa
AA seq
DB search
MDVSFILDSLNDKQREAVAAPLQNSLVLAGAGSGKTRVLVHRIAWLMHAYELSPYSLMAV
TFTNKAAREMQGRIEQLVGVPPQGMWVGTFHGLAHRLLRAHWRDAGLKENFQIMDSDDQL
RLIKRIMRELNIDDTRWPPKQVSWFINGQKDEGRRAAHVPDSHDPFSKGMRELYYHYEEA
CERGGLLDFGELLLRAHELMLSTPALLRHYQERFRHVLVDEFQDTNTIQYAWLRIMVGDH
GTITAVGDDDQSIYGWRGAKIENIQNFTKDFKDVGTVRLEQNYRSTGHILNAANGLIKHN
DDRLGKELWTDSGEGDPISLYAGFNEQDEARFIMGIVKQWRDKGTSLTDMAILYRSNAQS
RVIEECLVREQIAYRIYGGHRFYDRLEIKNALAYARLALDPNDDGAMERVINVPPRGIGE
RSIGTLREFARDHGCSMWQAAQEVVRQSLMTARATNAIKAFLHLIEGLSTTVQQPDLNLN
DIFEQIIEEAGLIPFHEKEKGEKGEARIENLKELVGAAGGFSWSDEDEEFSSPLMAFLDK
AVLDAGDAQADEYQDAVQLMTLHSAKGLEFPLVFLTGVEENIFPSKMSFEEPGRLEEERR
LCYVGITRAMEKLYITYAESRRLFGSESFNSPSRFIKELPPQCLEEVRLRSQVSRPVSMQ
RPDYNFEKNKLQNSSLLNSYKAPEITVNMGDRVNHPVFGEGLVINYEGQGPQARVQVNFD
DEGTKWLVLSFAKLEVL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttttatcctcgactcactgaatgacaagcaacgggaagcggtcgccgcg
cccttgcagaatagcctggtgttggctggagcagggtcgggtaaaacccgtgttttagtg
catcgtatcgcttggttgatgcacgcttacgagctatcgccttatagtctaatggcggta
acgttcaccaataaagccgcccgtgaaatgcagggacgtattgagcaattggttggcgtt
cctccacaaggcatgtgggtagggacattccacggcttggcgcatcgactgttgcgtgct
cattggcgtgatgcgggattaaaagaaaacttccagattatggacagcgatgaccagttg
cggctcatcaaacgtatcatgcgtgagttgaatattgacgatacgcgctggccgccaaag
caagtgtcttggtttattaatgggcaaaaagacgaaggccgtcgcgccgcgcatgtgccc
gacagccatgaccctttctctaaaggcatgcgcgagctgtattaccattatgaagaagcc
tgtgaacgtggcggattattggactttggcgagttgctgctacgcgctcatgaattgatg
ttaagcacgccagccttgttgcgccattatcaagagcgttttcgtcatgtgctggtggac
gagtttcaagacaccaacaccatccaatacgcttggttgcgtattatggtgggcgatcac
ggcaccatcaccgccgtgggcgacgatgatcagtcgatttacggttggcgtggtgcaaaa
attgaaaacatccaaaatttcaccaaagattttaaagacgttggcaccgttcgtttggag
caaaactatcgctcaacgggccatatcctcaatgccgccaatggcttgatcaaacacaat
gacgaccgtttaggcaaagagctttggaccgacagcggagaaggcgatcccatctcgctt
tatgcgggctttaacgagcaagacgaagcgcgttttatcatgggaatcgtcaaacaatgg
cgcgacaaaggtacctcgctgacggacatggcgattctgtatcgttcgaacgctcagtca
cgcgttatcgaggaatgccttgttagggagcagattgcttatcgaatttatggtgggcac
agattctacgatcgtcttgagatcaaaaacgccttggcctatgcgcgtttggcgttggat
ccgaatgacgatggcgcaatggagcgtgttatcaacgtgccgccgcgcggcattggtgag
cgcagcattggcaccttgcgagaatttgcccgcgatcacggttgttccatgtggcaggct
gcgcaagaagtggtacgccagtctttgatgacggcgcgtgcgacgaatgcgattaaagcg
tttttgcatctgattgaaggcttgagcaccacggtgcagcaacccgatttgaacctaaac
gatatttttgagcaaatcattgaagaggcgggtttgatcccgtttcatgaaaaagaaaaa
ggcgagaagggcgaagcacggatcgaaaacttgaaagagttggtcggcgcagcgggcggc
ttcagttggagcgatgaagacgaagagtttagctcaccgctaatggcgttcttggataaa
gccgtattggacgcaggcgatgcgcaagccgatgagtatcaggatgcggtgcaactgatg
acgttgcattccgcgaaaggtcttgagttccccttggtgttcttaaccggcgtggaagaa
aacattttccccagcaagatgtcctttgaagaaccgggtcgactcgaagaagagcgtcgt
ctttgttacgtgggcattactcgtgcgatggaaaagctgtacatcacctacgcggaatcc
cgtcgtttgtttggtagcgagtcgtttaacagcccctcacgttttatcaaagaactgccg
ccacaatgtttggaagaagtgcgtcttcgctcgcaagtgagccgtcctgtgtcgatgcag
cgcccggattacaactttgaaaagaacaaactgcaaaacagcagcctgttgaacagttac
aaagccccagaaattacggtgaatatgggcgatcgagtcaatcatccggtgtttggggaa
ggcttggtgatcaactacgaaggccaaggcccacaggcacgcgtacaggttaacttcgat
gatgaaggcaccaagtggctggtgttgtcgtttgctaaattggaagtgctttaa
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