Marinomonas profundi: J8N69_11200
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Entry
J8N69_11200 CDS
T07858
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mprf
Marinomonas profundi
Pathway
mprf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J8N69_11200 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mprf03019
]
J8N69_11200 (pnp)
03016 Transfer RNA biogenesis [BR:
mprf03016
]
J8N69_11200 (pnp)
Enzymes [BR:
mprf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J8N69_11200 (pnp)
Messenger RNA biogenesis [BR:
mprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J8N69_11200 (pnp)
Transfer RNA biogenesis [BR:
mprf03016
]
Prokaryotic type
tRNA degradation factors
J8N69_11200 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
Methyltransf_FA
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
UDV02158
LinkDB
All DBs
Position
2409298..2411406
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AA seq
702 aa
AA seq
DB search
MSITTKTFQFGNDTVTLETGRIARQATGAVLCTIGDAQVLATVVGAKSAKPGQDFFPLSV
FYQERAYAVGKIPGGFLKREGRPSEKETLTSRLIDRPIRPLFPKGFMNEVQVVCTVMSTN
TNLDADIAAMLATSAALTISGIPFNGPIGAARVGFNDESGYVLNPSYSDLDGSLLDMVVA
GTKDAVLMVESEAQELTEDEMLGAVLFAHKEMQSAITAITEFATECAKPRWEWQAETANV
SLVEALQSGYADQIEEAYGISEKMARYAQLGVVRDAAVAALVTEEGEFSEEDVTGAFSKL
EKRIVRRRVIDGKSRIDGRDNKTVRPINVEVGLLSKTHGSALFTRGETQAIATCTLGTSR
DSQMSDGLTGESKDSFMLHYNFPPYSVGECGRMGGVGRREIGHGRLARRGVQAVLPSEDE
FPYTIRIVSEITESNGSSSMASVCGASLAMMDAGVPLKAPVAGIAMGLIKEDDGFAVLTD
ILGDEDHLGDMDFKVAGTAEGITALQMDIKIEGINEEIMDIALSQALEARTHILREMAKV
IGYARPEVSPNAPSMATIKIDPEKIRDVIGKGGAMIRSITEQTGASIDLDDDGTVRIYAA
DKASSDAALLKIHEITAEAEIDKLYKGKVVRLAEFGAFVNILPGKDGLVHISQIAEERIR
AVTDFLAEGQDVIVKVLDVDARGRIKLSMKDVTEEEKAAYTE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattacgacaaaaactttccagttcggtaatgataccgtaacgctagaaacaggc
cgcattgcgcgtcaagcaacgggtgctgttctttgtaccattggcgatgcacaagtgctt
gctacggttgtaggggctaaatcagcgaaaccgggtcaagactttttcccattgtctgtt
ttttaccaagaacgtgcttacgcagtgggtaaaattccaggtggctttctaaaacgtgaa
ggccgtccttctgaaaaagaaaccctgacctcgcgtttaatcgaccgtccaattcgtcca
ttgttcccgaaaggtttcatgaacgaagtgcaggttgtttgtaccgttatgtcgactaac
acgaacttagacgcagatattgcggctatgttggcaacgtctgctgcattgactatttct
ggtattccattcaatggtccaatcggtgcggctcgcgttggttttaacgatgagtctggt
tacgttcttaacccaagctactctgatctagatggttctttgctagacatggtggttgcg
ggcacgaaagacgcagtattgatggttgagtctgaagcgcaagagttgactgaagacgaa
atgctaggtgcggttctttttgctcataaagaaatgcaatctgcgattacagctatcacg
gaattcgcaactgagtgcgctaagcctcgttgggaatggcaagcggaaacggcgaatgtc
tctttggttgaagcacttcaatccggttatgctgatcaaatcgaagaagcatacggtatt
agtgaaaaaatggcgcgttacgctcaactaggtgtggtacgtgatgcggcggttgcagca
ttggttactgaagagggcgagttctctgaagaggacgtgacaggcgctttctctaaacta
gaaaaacgcatcgttcgtcgtcgtgttatcgatggcaaatcacgtattgatggtcgtgat
aacaaaacagttcgtccaatcaacgttgaagtgggtctattaagcaaaactcatggttct
gctttgtttactcgtggtgaaacgcaggcgattgcgacttgtacactaggtacgagccgt
gattcacaaatgtctgatggtttgactggcgaaagtaaagacagcttcatgcttcattac
aacttccctccatactctgtcggtgaatgtggtcgcatgggtggtgtgggtcgtcgtgaa
attggtcacggtcgtctagcacgtcgcggtgttcaggcagtattgccttctgaagatgaa
ttcccatacaccattcgtatcgtgtctgagattactgaatctaacggttcaagctcgatg
gcgtctgtatgtggtgcgtctttggcgatgatggacgctggtgtacctctgaaagcacct
gttgcgggtatcgcaatgggccttatcaaagaagacgacggttttgctgtactaacggat
atcttgggtgatgaagatcaccttggcgacatggactttaaagtagcgggtacggcagaa
ggtatcacggcgcttcaaatggacattaaaattgaaggcatcaatgaagaaattatggat
atcgccttaagccaagcgcttgaagctcgtactcatattcttcgtgaaatggcgaaagtg
attggttacgcgcgtccagaagtgtctccaaatgcgccttctatggcaacgatcaaaatt
gatccagaaaaaatccgtgacgttatcggtaaaggtggtgcgatgattcgctccattact
gagcaaacgggtgcttctatcgatctagacgacgatggtacggtgcgtatttacgcagcg
gataaagcgtcttctgatgcggctttgttgaagattcatgaaatcacagcagaagcggaa
atcgataaactttacaagggtaaagtggttcgtttggcggagttcggtgcctttgtaaat
atcttacctggtaaagatggcttggtgcatatttctcaaatcgctgaagaacgtattcgt
gccgttacggatttcctagctgaaggtcaggacgttattgttaaagtgctcgatgttgat
gctcgtggtcgtatcaaattgtctatgaaagatgtgactgaagaagaaaaagccgcttac
actgaataa
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