Marinomonas profundi: J8N69_11945
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Entry
J8N69_11945 CDS
T07858
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mprf
Marinomonas profundi
Pathway
mprf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J8N69_11945 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mprf03400
]
J8N69_11945 (ung)
Enzymes [BR:
mprf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J8N69_11945 (ung)
DNA repair and recombination proteins [BR:
mprf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J8N69_11945 (ung)
Prokaryotic type
J8N69_11945 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UDV02302
LinkDB
All DBs
Position
2556828..2557547
Genome browser
AA seq
239 aa
AA seq
DB search
MTLTGDWQDYLADEFAQDYMLALQAFLQSEQQHKTLYPAEPEYFAALNATPFSQVKVVIL
GQDPYHGEGQAHGLSFSVKPNIKVPPSLVNIYKELEMDLGIVPAQHGFLGQWAEQGVLLL
NSVLTVEAGKAGSHQNKGWEIFTDKIIALINQHHQGVVFMLWGAYAQKKGRHIDRHQHCV
LESVHPSPLSAYRGFLGCQHFSKANDYLTTLGKTPIQWALKGVDDNMAHAEQKAQIPLF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgacattaaccggagattggcaagactatttagccgatgaatttgcccaagactacatg
ctggcgttacaggcattcttgcaatcagagcaacaacataaaaccttataccctgctgaa
cctgagtattttgcggcgttaaacgcgacgccgtttagtcaggtaaaagtcgtgattctg
gggcaagacccttatcacggcgaaggtcaagcccatggtttgtcgttttcggtaaagccc
aatattaaagtgccgccgtctttggtgaatatttataaagagcttgaaatggatttaggc
attgttccggcgcaacatggttttctgggccaatgggcggagcagggtgtgttgttgtta
aacagtgtgttgacggtagaggcgggtaaagccggttctcatcaaaacaaaggctgggag
atcttcactgataaaatcatcgcgctgattaatcagcaccaccaaggcgttgtttttatg
ttgtggggcgcttatgcgcagaaaaaaggtcgccatattgatcgtcaccaacattgcgtg
ttggaaagcgttcatccatcgcctttgtcggcttatcgtggctttttggggtgccagcat
ttttcaaaagccaatgactatttaaccacgcttggcaaaacgcccatacaatgggcattg
aaaggcgttgacgataacatggctcacgcagaacaaaaggcgcaaatacccttgttctga
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