Marinomonas profundi: J8N69_14940
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Entry
J8N69_14940 CDS
T07858
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mprf
Marinomonas profundi
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mprf03009
]
J8N69_14940
Enzymes [BR:
mprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J8N69_14940
Ribosome biogenesis [BR:
mprf03009
]
Prokaryotic type
rRNA helicases
J8N69_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
SNF2-rel_dom
AAA_19
AAA_11
Helicase_RecD
UTP25_NTPase-like
Cas3-like_C_2
MINION
RPAP3_C
Motif
Other DBs
NCBI-ProteinID:
UDV02848
LinkDB
All DBs
Position
complement(3206700..3207905)
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AA seq
401 aa
AA seq
DB search
MSFAELDLDFTIEKAISDLGFETPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAI
QHIIDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTQHTRIQSHLIIGGTPYGMQQQQL
SEPCDILVATPGRLVELDDKRWLDLTDVSYFVIDEADRMLDMGFVSAINRIAKELPQEHQ
TLMFSATLEGEKMGRFASALLNSETQQIRLGESSRTVPSQIRQIAYRVDSEEHKEAVLKH
LLTQERVQQAVLFVSNREHVDVWVQRVRNMGLMCDGLHGEMKQGDRSEHMKQMKRGRLQV
LVATDVASRGIDLPEINTVINLRLPRKADSYIHRAGRASREGAPGDCISLIDINDLPMIE
KIQRFMQANIKFGRIEGLEAKTKARSPSSKKKKKKPAPSKK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgctgaattagatttggatttcaccatagaaaaagccattagcgatcttggt
tttgaaaccccaacagagatccaagaacaagcgattccgattgccctagacggctcagac
ctactggcaaccgccccaacaggcacaggaaaaaccatcgccttttgtgcgccagccatc
caacacattattgaccgtgacgaacagtccacaaccgcgcctaaagtcttgatattggcc
ccaagccgagaactagcacgccagatttttaatgtggtagaacagctcacacaacacact
cgcattcaatcacaccttattattggtggcacgccttatggtatgcagcaacagcaactt
agcgagccctgcgacattctagtggcgactccaggccgattggttgaactcgatgataaa
cgctggctagatttaaccgacgtatcttactttgttatcgacgaagccgaccgcatgcta
gacatgggctttgttagcgccattaaccgcattgccaaagaattaccccaagaacaccaa
accttgatgttttccgccaccttagaaggcgaaaaaatgggccgttttgccagcgcccta
ctgaatagcgaaacacaacaaattcgcctcggagaatcatctcgtaccgtacccagccaa
attcgtcaaatcgcttaccgagtagacagcgaagaacacaaagaagcggtactaaaacac
ctactaacacaagaacgcgttcaacaagccgtgctcttcgtgtccaaccgtgagcacgtc
gatgtttgggtacagcgcgttcgtaacatgggcttaatgtgcgacggcttgcatggcgaa
atgaaacaaggcgaccgcagtgaacacatgaaacaaatgaaacgtggccgcttgcaagtc
ctggtcgcaacagacgttgcatcccgtggtatagaccttccagaaattaacaccgtgatt
aaccttcgcctaccgcgcaaagcagactcatacattcaccgcgctggacgtgcctcacga
gaaggcgcaccgggcgactgcatctcgttaatcgatattaacgacctccccatgatcgaa
aaaattcaacgcttcatgcaagccaacattaaatttggccgtatcgaaggactggaagcc
aaaaccaaagcacgctcacccagcagcaagaagaaaaagaaaaaacccgcgccaagcaaa
aaatag
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