Marinomonas profundi: J8N69_14980
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Entry
J8N69_14980 CDS
T07858
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mprf
Marinomonas profundi
Pathway
mprf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J8N69_14980 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mprf03019
]
J8N69_14980 (groL)
03110 Chaperones and folding catalysts [BR:
mprf03110
]
J8N69_14980 (groL)
03029 Mitochondrial biogenesis [BR:
mprf03029
]
J8N69_14980 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mprf04147
]
J8N69_14980 (groL)
Enzymes [BR:
mprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
J8N69_14980 (groL)
Messenger RNA biogenesis [BR:
mprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
J8N69_14980 (groL)
Chaperones and folding catalysts [BR:
mprf03110
]
Heat shock proteins
HSP60 / Chaperonin
J8N69_14980 (groL)
Mitochondrial biogenesis [BR:
mprf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
J8N69_14980 (groL)
Exosome [BR:
mprf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J8N69_14980 (groL)
Exosomal proteins of other body fluids (saliva and urine)
J8N69_14980 (groL)
Exosomal proteins of breast cancer cells
J8N69_14980 (groL)
Exosomal proteins of colorectal cancer cells
J8N69_14980 (groL)
Exosomal proteins of bladder cancer cells
J8N69_14980 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
UDV02856
LinkDB
All DBs
Position
3212665..3214308
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKEVKFGDSARQQMLRGVNVLADAVKVTLGPKGRNVVIEKSYGSPLVTKDGVTVAKEI
ELENKFENMGAQMVKEVASQANDVAGDGTTTATVLAQALVTEGLKSVAAGRNPMDLKRGI
DKAAAAVVKELALLSTPCTDTRAIEQVGTISANSDTSVGRIIAEAMERVGKEGVITVEEG
SGFDDELAVVEGMQFDRGYLSPYFINNQETMSAELENPFILLVDKKITNIRELLPVLEGV
AKASRPLLIIAEDVEGEALATLVVNSMRGIVKVAAAKAPGFGDRRKAMLEDIAVLSGATV
ISEEVGLSLETATLEQLGTAKRVTLTKESTTIVDGAGIAANITSRVEQIRAEIANSSSDY
DKEKLQERVAKLAGGVAVIKIGAATEVAMKEKKARVDDALHATRAAVEEGVVAGGGVALV
RALTKVIDLVGDNEDQNVGIALALRAMEAPMRQIVTNAGDEASVVVDKVKQGEGNYGYNA
ATGEYGDMLEMGILDPAKVTRSALQAAASVAGLMITTEAMIAEAPKEDAGMPDMGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaagaagtaaaatttggagacagcgcacgtcagcaaatgcttagaggtgtg
aatgttcttgcagacgcagtaaaagttactttggggccaaaaggccgtaacgttgttata
gaaaaatcatatggttcaccgcttgtgaccaaagatggtgtaaccgttgccaaagaaatc
gaattggagaacaaattcgagaacatgggcgcgcaaatggtaaaagaagtagcgtctcag
gcaaatgatgtggctggtgacggtacaacaacagcgactgtattggcgcaagcgctggta
acagaaggcttgaagtcggttgctgcaggtcgcaacccaatggatcttaaacgtggtatc
gacaaagccgcggcggcggttgttaaagagcttgcgttgctgtctacaccttgtactgat
actcgtgccattgagcaggttggtactatttctgccaattcagatacgtctgtcggtaga
attattgcagaagcaatggagcgtgttggtaaagaaggtgtgattacggttgaagaaggt
tctggttttgatgatgaactagcggtcgttgaaggtatgcagttcgatcgcggttaccta
tcgccttacttcatcaacaatcaagaaaccatgagtgcagaacttgaaaacccatttatt
ctattggttgacaagaaaatcactaacattcgtgaattgcttccggtattggaaggtgtt
gctaaagcatcgcgtcctttgttgattattgcagaagatgtggaaggcgaagccttggca
actttggttgtcaacagtatgcgtggaatcgttaaagtggccgctgcaaaagcgcctggt
tttggtgatcgccgtaaagcgatgcttgaagatattgccgttctttctggtgcaacggtt
atttctgaagaagtgggtttgagtttagaaacggcgacacttgagcaacttggtacggcg
aaacgcgttaccttgacgaaagaaagtacgacgattgtcgacggtgcgggtattgccgct
aatattaccagccgtgttgagcaaattcgtgcagaaatcgctaactcttcttctgactac
gataaagagaagcttcaagagcgtgtggctaaattggctggcggtgttgctgtcatcaag
attggtgccgcgacagaagtggcaatgaaagagaaaaaagcacgtgtagacgatgcgctt
cacgcgactcgtgctgcagttgaagaaggtgtggttgcgggtggtggtgttgctctcgtt
cgcgcactgactaaagtgatcgatcttgttggtgataacgaagaccaaaacgtcggtatt
gctttggcattacgtgcgatggaagcgccaatgcgccaaatcgttaccaacgcaggagac
gaagcgtctgttgttgttgataaagtaaaacaaggcgaagggaactacggctacaacgca
gcgactggagaatacggcgacatgttggaaatgggtatcctagatccagcaaaagtaacg
cgttctgcactgcaagcagctgcctctgtagcgggtcttatgatcacgacggaagcaatg
attgctgaagcgccaaaagaagacgctggcatgcctgatatgggtggcatgggcggaatg
ggtggtatgggcggcatgatgtaa
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