Marinomonas profundi: J8N69_15175
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Entry
J8N69_15175 CDS
T07858
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
mprf
Marinomonas profundi
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mprf03400
]
J8N69_15175
DNA repair and recombination proteins [BR:
mprf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
J8N69_15175
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
AAA_16
DZR
Zn_Ribbon_1
SNF2-rel_dom
SLFN-g3_helicase
T1R_D3-like
AAA
HPS6_C
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
UDV02892
LinkDB
All DBs
Position
complement(3257403..3259160)
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AA seq
585 aa
AA seq
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MSQTFQLRDYQTQAVNACLEHFRNHNTPAVVVLPTGAGKSLVIAELSRLAKGRVICLAHV
KELVEQNHAKFLATGASAGIFSAGLKQKNSTEKTTFASIQSICANLADFNEPVSLIIIDE
CHRVGMEDSGQYNKTIEHFRALNPTVKILGLTATPYRLGSGWIYQNHYHGYTRDCPDGFF
KKCIFELPLQHMVKNGYLTPPIHYDAAIAHYDFSLLTESLDGEQNTDDIALNELIHKHPR
VTQAVTEQILQLSEDRQGVMIFAATIDHAKEIASYLPADKTALVTGKTKLRQRDSLIAAF
KAKDIKYLVNVSVLTTGFDAPHVDVIAILRPTQSISLFQQIVGRGLRLSPGKKDCLILDY
TNNGYNIFQPEIGEKRPAQDAVAVQIHCPVCDFANIFWGRKDAEGNVLEHFGRRCHGLIE
TENTEEQCRYRFRFKRCPHCNEENDIAARQCQHCAEKLIDPDDLLRSALNLKDNKVLRCS
GMTPEINTKDKSLKITYHDEDGLTLSETFRFQYKKSRQVFNDLFARRIANGSQAIAFDTL
EEVERFLPYLPTPDFVIAKKQKQHWQVTERLFDYQGPYRKANELG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacattccaattacgcgactatcaaactcaagccgttaacgcgtgtttggaa
cactttcgcaaccataatacccctgctgtcgttgtacttcccactggggcgggaaaaagc
ctagtcatcgcagaactcagtcgattggcaaaaggtcgtgttatttgcttggcccatgtc
aaagaattggtcgaacaaaaccacgctaagtttctggcaacgggggcttctgcgggtatt
ttttcagcgggcttaaagcaaaaaaacagcacagaaaaaaccacctttgccagcattcaa
tctatctgcgcgaaccttgctgattttaacgagcctgtcagcttgatcatcatcgacgag
tgccaccgcgttggcatggaagacagcggccaatacaacaaaaccattgagcattttcgc
gcactcaacccaaccgtaaaaatccttggtttgaccgccacgccttatcgccttggcagc
ggctggatttaccaaaaccattaccatggttacactcgtgattgtccagatggctttttt
aaaaaatgtatctttgaactgccactgcaacacatggtgaaaaacggttatttaaccccg
ccaatccattacgatgccgccatcgcccattatgacttcagcctattaacggaaagtttg
gacggcgaacaaaataccgatgacattgctttaaacgaattaatacacaaacacccaaga
gtcactcaagccgtgaccgagcaaatattacagctcagcgaagaccgccaaggggtgatg
atttttgccgccaccatcgaccacgccaaggaaatcgccagctacctaccggcggataaa
accgctctcgttaccggcaagaccaaactcaggcaacgggattccctaatcgcggcgttt
aaagccaaagacattaaataccttgttaatgtgtccgtattaaccaccggctttgacgcc
ccacacgtcgatgtgatcgccattttacgccctacgcaatcgatcagtttatttcaacaa
attgtcggtcgaggtttgcgcttaagcccaggcaaaaaagactgtctcatcttggattac
accaacaacggctacaatattttccaacctgaaatcggtgaaaagcgccccgctcaagac
gccgtcgccgtgcaaatacattgcccagtctgcgattttgccaatattttttggggacga
aaagacgccgaaggcaacgtccttgagcactttgggcgccgttgtcatggcctgatagaa
acagaaaatacagaagagcaatgccgctaccgttttcgctttaaacgctgccctcattgc
aacgaagaaaacgacatcgccgcacgccaatgccagcattgtgcagagaaactgattgat
ccagacgatttattaagaagcgcgcttaacttaaaagacaacaaagtattgcgctgttct
ggcatgacaccggaaataaatacgaaagacaaaagcttgaaaatcacttatcacgatgaa
gatggcctaaccttgtcagaaacctttcgttttcagtataaaaaatcacgacaggtattt
aacgacttgtttgcacgcagaatagcaaacggcagccaagccattgcatttgatacgctt
gaagaagtggagcgttttttaccttacctgccaacgcccgatttcgtcattgccaaaaaa
caaaaacaacactggcaagtcacagaaaggttattcgattaccaaggcccttatcgaaaa
gccaatgagcttggctag
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