Marinomonas profundi: J8N69_15395
Help
Entry
J8N69_15395 CDS
T07858
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mprf
Marinomonas profundi
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mprf03400
]
J8N69_15395
DNA repair and recombination proteins [BR:
mprf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J8N69_15395
Archaeal homologous recombinant proteins
J8N69_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
RsgA_GTPase
nSTAND3
MMR_HSR1
DUF5830
AAA_22
DUF87
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UDV02929
LinkDB
All DBs
Position
3309219..3312962
Genome browser
AA seq
1247 aa
AA seq
DB search
MKICKLRLKNLNSLKGEWEIDFTKAPFDDAGVFAIVGPTGAGKSTLLDAICLALYHETPR
LKVSPSQNDVMTRHTAECLAEVEFEIKGKGYRAFWGQRRARGQSDGKLQPMTCELCERDG
TIITTKINEKIDKIADITGLDFSRFTKSMLLAQGGFSAFLNASANDRAELLEELTGTEIY
GDVSKWVFDKHKQEKQAIAALESVNEQTQLLTDDAFAELKQTELSFAANEKSNAQALKQQ
QTLLEWRRTEQQLQVQVAQYQQQVDEASQALADFAPQQQGLEQALKAQGLQADYDKQQGL
KARLDQNQADITQYTKTQETRLKQSQALTASVEQAKETLTNARAELEALNNKINNEIQPI
LSRQESVKAQHQDVSARLKQAVEKVDDQQSQLNAMTEKRASVDKACDESKAILGRWTAPE
KIENQLASWQHQAQSMAINVQAIAELERQIVSNTKEYDVARASYSANQAKLEQGQLRLSE
RQQTLQNTLDAFMALSSQSEYTDWQKTYHYTERAQYNAQALWKQYQQYQALQTQLVDLDT
NLNATTSHIQQQKSQLEQQRQAYKDKLRHQKSVEKLAEAERHIVALTQLRDELGEHDACP
LCGASEHSLANALYQAESGSQEEFVRLGKELDGLKGQGIQLVADLESMQREFTSGQTRRE
QLTDSLHTTERELKEWLVSLTHYVDRQNTRFDLLDKEQVLALVQRVDQDWQALQETAPKL
DALQQSRLTLETELLSVHAQQQVTQQQVAKDESQCQLLWQALEAYQQSLVSRKGEQEQSA
GQLRIDMQQVGVPEGYFDVSLADALAQLQEAMTQWRDSKAGYDALLQQGEQLSYESKSLA
NSLKESHQLGDDIHRKATELDAELASIAEQLYERLGDKSIGELRQAAQSLADHAQQRLEK
VEAERQQVAQALASSKATLEALDKSYLGLSKEHEVALSDWQQRLAEKGFDSEAVWLQATL
STEEISQRQAALKQLEEAVSRLQTLLNQANESLLKHNQNKSEFLALGDSAFDGSASESAS
LEALEEKYAELDAERQALHRQWGVVTQQIQEEAQRRERVAKSKDALEARREAFVHLERLN
HLIGSADGAKFRRFAQSLTLDHLVYLANQHLGILHRRYQLMRNEDALSLLVVDTWQADAS
RDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLESALDALDNLH
SSGKTIGIISHISALKERIPVQIKLTKQSGLGVSRLAAEFAVHPADN
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttgcaagctgcgtctaaagaatttgaactccctgaaaggcgaatgggaaata
gattttaccaaagcgccctttgacgacgcgggtgtgttcgccattgttgggccaacgggg
gcgggcaaatcgaccttgttagacgcgatttgtttggcgctttaccatgaaacgccgcgt
ctcaaagtttcccccagtcagaatgatgtgatgacgcgtcataccgctgaatgcctggcg
gaagtcgagtttgaaattaagggcaaaggctatcgtgctttttggggacaacgacgcgcc
cgaggccaaagcgatggcaagttacaacccatgacctgtgagttgtgtgaacgcgatggc
accattattaccactaagattaacgaaaaaatcgacaagatagccgacatcacggggtta
gatttttcgcgttttaccaagtctatgttgcttgcccaaggcggtttttcggcctttttg
aatgcctcagctaatgatcgcgcagaacttctcgaagagctaacgggcacagaaatttat
ggtgatgtgtcgaaatgggtgtttgataaacataagcaagaaaagcaggcgattgcggcg
ctcgaaagtgtcaatgagcagactcaattactaacagacgacgcttttgctgaattaaag
caaaccgagttgagttttgctgccaatgaaaaatccaatgcgcaggcgctcaaacagcag
caaaccttacttgaatggcgacgtactgagcaacagctgcaagtgcaagtggctcaatac
cagcaacaagtagacgaagcgagtcaggcgctcgcggattttgcgccgcaacagcaagga
ttggagcaagcgctaaaggcgcaaggtctgcaagcggattatgacaagcagcaaggtttg
aaagctcgcttggatcaaaatcaggcggatattacgcaatataccaagacgcaagaaaca
cggctcaagcaaagtcaggcgttgacggcatcggttgaacaggcgaaagagacactcacc
aatgctcgtgctgaattggaagccttgaataacaagatcaacaatgaaatccagcctatt
ttgtcgcgccaagagagtgtcaaagcccagcatcaagatgtttccgctcgattaaaacaa
gccgttgaaaaagttgacgatcagcagtcacaactaaacgccatgactgagaagcgggct
agtgttgataaagcatgtgacgaaagtaaagccattttgggccgctggaccgcgccggaa
aaaatcgaaaatcaattggccagctggcaacatcaagcgcaaagcatggcgatcaatgtg
caagccattgccgagcttgagcgtcaaattgtatcgaatacaaaagagtatgatgttgct
cgcgcttcatactcagcaaatcaagctaagttagagcaaggtcaattgcgcctgtctgaa
cgacaacaaaccttgcagaacaccctagatgcctttatggcgttgtcgtcgcaaagtgaa
tacacggattggcagaaaacttatcattacactgagcgagctcaatataatgcacaggcc
ctttggaagcagtatcaacagtatcaagcgctgcaaactcaattggtcgatttagacacg
aatctgaatgcgacgacaagccacattcaacagcagaaaagtcagttagagcaacaaagg
caggcttacaaagataagcttcgacatcagaagtcggttgaaaagcttgctgaggcagag
cgtcatatcgtcgcgttaacacagttgcgtgatgagctgggcgaacatgatgcttgccct
ttgtgtggtgcatcggagcactcgcttgccaatgccttgtatcaagcggagtcaggtagc
caggaagaattcgttcgtttaggcaaagaattggacggcctcaagggacaaggaatacag
ctggtggcggacttagaatccatgcagcgagaattcacctctgggcaaactcgacgcgag
caattaacggatagcttgcacacgacagagcgggagttaaaagaatggctggtgtcatta
actcactatgtggatcgtcaaaatactcgctttgatctgcttgataaggagcaggtgttg
gctctggttcagcgtgttgatcaagattggcaggcgttgcaagagaccgcgcctaagctt
gacgcgcttcagcaatcgcgtttgaccctagagacagagttactgagtgtgcatgctcag
cagcaagtcacccaacaacaagtggcgaaggatgagtcacagtgtcagttattgtggcaa
gctttagaagcgtatcaacagagcttagttagcaggaagggcgagcaagagcaaagcgct
ggccagttacgtattgatatgcagcaagtgggtgttcctgaaggctactttgatgtgtca
ttggcagacgctttggcgcagttgcaagaggcgatgacgcaatggcgcgatagcaaggcg
ggctacgacgcactattgcagcaaggggagcagctgagttacgagtcgaaaagcttagca
aattcgttaaaggagagtcatcaattaggtgatgatattcataggaaagccacagagctt
gacgctgaattagccagtattgctgagcagctgtatgaacggttaggcgataaaagtatt
ggtgagcttcgccaagcagcgcaatcactggctgatcatgctcaacagaggctagaaaaa
gtagaagctgaacgacagcaggtggctcaggcgctggcgtctagtaaggcgacattggag
gcgctcgataaatcttaccttgggctatcgaaagaacatgaagttgctttgtccgattgg
cagcaacgtctggctgaaaagggttttgacagtgaagcggtttggttgcaggcgacttta
tccacagaggaaataagtcagcgacaagccgcgttgaagcaacttgaggaagcggtgtcc
cgcttacagacgttactgaatcaagcgaatgaatccttattgaagcacaatcaaaacaag
tccgagtttttagcgcttggagattcggcgtttgacggttctgcttctgaaagcgcttct
cttgaagcgctggaagaaaaatacgctgagcttgatgctgagcgccaagcactgcaccgt
caatggggggtggtaactcagcagattcaagaagaggcacaacgtagagagcgggtagct
aaatcgaaggacgcgttggaagcgcgccgcgaggcatttgtgcatcttgagcggttgaat
catttgattggttctgccgatggcgcgaaattccgccgctttgcgcaaagtctgacgttg
gatcatttggtgtatttggcgaatcagcatttgggtatcttgcatcgtcgctatcagttg
atgcgcaacgaagatgctttgtccttgctggtggtggatacttggcaagctgatgcatca
cgtgacacgaaaaccttgtcgggtggggagtctttcttggtgagtttggcgttggcgctg
gctttgtctgatttggtgtcccataaaaccagtatcgattcgttgttcttagatgaaggt
ttcggtaccttggacagtgaaacgctagagtcggcgttagatgctttggataacctgcat
tcctctggcaaaaccattggcattattagtcatatcagtgcgctaaaagaacgaattccc
gtgcagattaaactgaccaaacaaagtggtttaggggtgagtcgtttagcggcggaattt
gccgttcacccagctgataattga
DBGET
integrated database retrieval system
