Marinomonas profundi: J8N69_15675
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Entry
J8N69_15675 CDS
T07858
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
mprf
Marinomonas profundi
Pathway
mprf00260
Glycine, serine and threonine metabolism
mprf00630
Glyoxylate and dicarboxylate metabolism
mprf00785
Lipoic acid metabolism
mprf01100
Metabolic pathways
mprf01110
Biosynthesis of secondary metabolites
mprf01200
Carbon metabolism
Module
mprf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J8N69_15675 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J8N69_15675 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
J8N69_15675 (gcvP)
Enzymes [BR:
mprf01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
J8N69_15675 (gcvP)
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Gene cluster
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Pyridoxal_deC
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
UDV02980
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Position
complement(3377768..3380632)
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AA seq
954 aa
AA seq
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MTSCIRDLLNNDEFIARHIGPDESEQAKMLATIGINSLPELIEKTVPEAIRQANLDLSAD
PVSESDALVQLKAIANQNKVARSFIGMGYHDTHVPSPILRNLLENPGWYTAYTPYQPEIS
QGRLEALLNFQQVIIDLTGMEISNASLLDEATAAAEAMTLMKRSNRKKSDKLFVASHCLP
QTIDVVKTRAELLEIDVIVDDIANFAQHDVFGAIFQYPGIDGTVTDLAPVIAQAHAQDAL
VSIAVDLLSLVLLKSPGDMGADIVFGSAQRFGVPMGFGGPHAAFLATKDAFKRSMPGRVI
GVSKDSHGKSALRMAMQTREQHIRREKATSNICTAQALLAMMAGFYAVYHGPAGLKKIAN
RVAALTNCFAQAIQQQGFTTNESYFDTVIVNTGEQTDSIMAKGAAKLMNFCKVSASQVSI
ALNETITPNDVIDLAACFGATLSLDDITNTESAYGFDAALLRQDAILTHPVFNSHHSETE
LMRYMHQLEVKDIALNQSMIPLGSCTMKLNAASEMIPVTWAEFGRIHPFAPDNQVTGYHA
LLQELIEMLSKATGYDTVSLQPNSGAQGEYAGLIAIDKYHKSRGDHQRDVCLIPSSAHGT
NPASAALAGMKVVIVKCDENGNIDLVDLAEKAEKHAAQLSCIMATYPSTHGVFEEHIREV
CDIVHKFGGQVYIDGANLNALVGVAPPGTFGGDVSHLNLHKTFCIPHGGGGPGMGPIGVK
SHLAPFLPGHAVTPVMGMADQHGAVSAAPYGSASILVITWMYIKMMGDKGLRDATFNAIL
NANYIAKRLGEHYPILYTGKNGTVAHECIIDIRPLKAESGISEEDIAKRLMDFGFHAPTM
SFPVAGTLMIEPTESENLEELDRFCDSMIQIRKEISKVQAGEWPLEDNPLVNAPHTADSL
LDAEWAHAYSRKEAAYPLNWIKARKYWPPVGRIDNVYGDRNLFCECPPIDSYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtgcattcgcgatttgttaaacaacgatgaatttattgctcgccacattggc
cctgacgaatcagagcaagccaaaatgctagcaacaatcggcataaacagccttccagaa
ctgattgaaaaaaccgttcctgaagccattcgtcaagcaaatctagacctttcagctgac
cctgttagcgaaagcgacgcacttgtgcagctaaaagccatcgccaaccaaaacaaagtg
gcgcgctcttttatcggcatgggttaccacgacacacatgtgccatcgcctattttgcgc
aatttattagaaaacccaggctggtacacagcgtacacaccttaccaacctgaaatatct
caaggtcgcttggaagcactattaaacttccaacaagtcatcatcgacctgactggcatg
gaaatctctaacgcctctttgctagacgaagcaacggccgcggccgaagccatgacgcta
atgaagcgctcaaaccgcaaaaaaagcgacaaactgtttgtcgcaagccattgcctaccg
caaaccatagacgtggtaaaaacccgtgccgagctacttgaaatcgacgtaattgttgac
gatatcgccaactttgcacagcacgatgtgtttggtgccatcttccaatacccaggcatc
gacggcaccgtcactgatttagcgcccgtcatagcgcaagcacacgcacaagacgcgctt
gtcagtattgcggttgatctactgtctcttgtattactaaaatcccctggcgatatgggc
gcagacattgtcttcggttctgcacaacgttttggtgtgccaatgggctttggcgggcct
cacgccgccttcctagccaccaaagacgctttcaaacgctccatgccaggccgtgtaatt
ggcgtatcaaaagacagtcacggtaagtccgcactgcgcatggccatgcaaacgcgtgag
caacacattcgtcgtgaaaaagcgacgtccaatatttgtaccgctcaagccctactggcc
atgatggcaggcttctacgcggtttatcacggccctgctggcttgaagaaaatcgccaac
cgcgtggcagcattgacaaattgctttgcgcaagcgattcagcaacaaggctttacaacc
aacgagagctactttgataccgttatcgtcaatactggcgagcaaactgacagcatcatg
gcaaaaggcgcggcgaagttaatgaacttctgcaaagtgtctgcaagccaagtctctatt
gcgctaaacgaaaccatcacacccaatgacgttatcgacttggccgcatgcttcggtgca
accctgtcactagacgacatcaccaatactgaaagcgcttatggttttgatgccgctcta
ttgcgtcaagatgctattttgactcacccagtattcaacagtcaccacagcgaaaccgaa
ttgatgcgctatatgcaccaattggaagtgaaagacatcgccctaaatcaaagcatgatc
ccgcttggttcttgcaccatgaagctaaacgcggcgtctgaaatgattccggtgacttgg
gccgaattcggtcgcattcacccgtttgcgccagacaatcaagtgactggctaccatgcc
ttgttgcaagagctaatcgagatgctgtccaaagcaacgggctacgacacggtttctttg
caaccgaactcgggtgctcaaggtgaatacgcgggtcttattgcgatcgacaaataccac
aagtctcgcggcgatcaccagcgcgacgtgtgcttgatcccaagttctgctcatggcacc
aacccagcgtctgccgctttggcaggcatgaaagtagtcattgtaaaatgcgacgaaaac
ggcaacattgacttggtggatcttgcggaaaaagccgagaaacacgccgcgcaactaagc
tgcatcatggcgacatacccatcgactcacggtgtatttgaagaacacattcgcgaagta
tgtgacattgttcataaattcggcggccaagtgtacatcgatggcgccaacttaaacgcc
ctagtgggcgttgcgcctccaggcacctttggcggggacgtttcccaccttaacctgcac
aagacattctgcattccacatggcggcggcggccctggtatgggtcctattggggttaaa
tcacaccttgcgcctttcctaccaggccatgcggttacaccggttatgggaatggctgac
cagcacggcgccgtgtccgccgcgccatacggcagcgccagcattctggtgattacttgg
atgtacatcaagatgatgggcgacaaaggcttgcgcgatgcgacttttaacgccattttg
aatgccaactacattgctaaacgtctaggtgagcattaccccattctttacacgggcaaa
aacggcacggtggcgcacgaatgtattattgatattcgtccgctaaaagcagaatctggc
atcagcgaagaagatatcgctaagcgcttgatggacttcggtttccatgcacccaccatg
tctttcccggttgctggcaccttaatgatagaaccaacggaatctgaaaacttggaagaa
ctagatcgcttctgcgattccatgattcagatccgcaaagaaatcagcaaagtccaagcg
ggtgaatggcctctagaagacaacccgttggtcaatgcaccgcataccgccgacagcctt
ctcgatgcggaatgggcgcacgcttactcacgtaaagaagcggcttacccacttaactgg
atcaaggcgcgtaaatactggccaccggttggccgtattgacaacgtctacggtgaccgc
aacttgttctgcgaatgcccaccaatagacagctacgaagattaa
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