Marinomonas primoryensis: MP3633_0172
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Entry
MP3633_0172 CDS
T06705
Name
(GenBank) superfamily II DNA/RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mpri
Marinomonas primoryensis
Pathway
mpri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MP3633_0172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpri03019
]
MP3633_0172
Enzymes [BR:
mpri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MP3633_0172
Messenger RNA biogenesis [BR:
mpri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MP3633_0172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
AAA_19
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKK78910
UniProt:
A0A859CWM9
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All DBs
Position
KMM3633:complement(183222..184472)
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AA seq
416 aa
AA seq
DB search
MNFTSLGLLKEITDVIDELGYAIPTPIQQAAIPAVLAQKDVMAGAQTGTGKTAAFALPLL
HKILQAKSTNDAPRIQVLVLTPTRELAQQVHASFVKYSKNLPIKSVVVYGGASINVQLDA
LRNGCDVLVATPGRLLELVMKKLIDLSAVQTLVLDEADRMLDMGFIIDIQRILKTLPYKR
QTLFFSATFNDDIFALSKVLLKDPQLIEVDNRNTTATQVEQTIYAVDKDRKSALLSYLIG
SKNWQQVLIFTRTKQGADELAKEMQKDGVATQSIHGDKSQGARDRVLADFKAGKVRALVA
TDVAARGIDIEQLLYVVNHELPYNAEDYIHRIGRTGRAGATGLAISLVSEKERYLLTDIE
KLVGEQFVPQWLPGFEPDLNKVDSPSKKREPSKKEQRAKALGLHSSKDKKPKKKRR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacctctttaggacttcttaaagaaatcaccgatgtcatagatgaattaggc
tatgcaattcccacccccattcagcaagctgccattcctgccgtactcgcacagaaagat
gtcatggctggcgcccaaacagggacggggaaaacggcggcgtttgccttgcctcttcta
cacaaaatactacaagctaaaagtacaaatgatgcccctcgaatccaggttcttgtgttg
acgcccactcgtgagcttgcacaacaagtccatgctagctttgtaaaatacagtaagaat
ctccccataaagtccgttgtcgtttatggcggtgcgagcattaatgtacaacttgatgca
ctaagaaatggttgtgatgtattggtcgcaacaccggggcgattgcttgaattggtcatg
aaaaaactaattgatttaagcgccgtgcaaaccttggtgttagatgaagccgaccgaatg
ctcgacatgggcttcattatcgatattcaaagaatactgaagaccctcccttataagcgg
caaacgttgttcttttccgccacctttaatgacgatatttttgcactcagtaaagtctta
ttaaaagaccctcaactcattgaggtcgacaatcgtaatacaacggcaactcaagttgag
caaaccatttatgccgttgataaagatcgaaaaagcgcgcttttatcgtatttaattggc
tcaaaaaattggcagcaagtacttatatttactcgtactaaacaaggtgcagatgaatta
gcaaaagaaatgcagaaagacggggtagcgacccaatctattcacggtgataaatctcaa
ggggcacgcgatcgtgtcttagcggactttaaggctggcaaagtgcgagcactagtggca
accgatgtcgcagcacgaggcatcgacattgaacagctactatatgtagtgaatcacgaa
ctaccttataacgcagaagattacattcatcgaataggcagaacaggacgcgctggcgca
acggggcttgctatttccttagtctctgaaaaagagcgctatttactcaccgatatcgaa
aagctcgtcggtgagcaatttgttccccagtggttgccaggattcgaacctgatttaaat
aaagtagatagccctagcaaaaagcgtgagccgtctaaaaaagaacaaagagcaaaagcg
cttggcttacattcttcaaaagataaaaagccaaagaaaaagcgccgttag
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