Marinomonas primoryensis: MP3633_0405
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Entry
MP3633_0405 CDS
T06705
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mpri
Marinomonas primoryensis
Pathway
mpri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MP3633_0405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpri03021
]
MP3633_0405
03019 Messenger RNA biogenesis [BR:
mpri03019
]
MP3633_0405
Transcription machinery [BR:
mpri03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MP3633_0405
Messenger RNA biogenesis [BR:
mpri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MP3633_0405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Fungal_virus_P2_C
AAA_22
NACHT
AAA_25
S1CSD-TOTE-2
HHH_RecD2
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QKK79143
UniProt:
A0A859CSG7
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All DBs
Position
KMM3633:complement(431646..432968)
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AA seq
440 aa
AA seq
DB search
MINSNSVNLPQNELIQNPLMNLTDLKQKSVHELLEIAAEMGLENMARSRKQDVIFSILKR
HAKGGEDIYGDGILEILQDGFGFLRSPDCSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKI
RPPKDGERYFALLKVSEINFDKPESVRNKILFENLTPLFPDERLLMEAGNGSTEDVTSRI
IDLVAPMGKGQRALIVSPPKAGKTFMLQNIANAITRNSPECHLIVLLIDERPEEVTEMSR
TVRGEVVASTFDEPPARHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPSS
GKVLTGGVDANALERPKRFFGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNS
ELHLDRKIAEKRTFPAINIRRSGTRREDLLTSEDELQRMWILRKLLNPMEDVAATEFLID
RLKVTQTNDEFFESMKGKNK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgattaactctaattccgtcaatcttcctcaaaatgagctaatacaaaatccgcttatg
aaccttaccgacttaaaacagaaatcagtacacgagcttttagaaatcgcagcagaaatg
ggcctagaaaatatggctcgttctcgtaaacaagatgttattttctcaatcctaaagcgt
catgcgaaaggtggggaagacatttatggcgacggcatcttagagattcttcaagatggc
tttggtttcttacgctcacctgactgctcatacttagcaggaccggacgatatttatgta
tcaccaagccaaatacgacgctttaacctgcgtactggcgataccattgccggaaaaatt
cgcccacctaaagatggcgagcgctactttgccttattaaaagtcagtgaaatcaacttt
gataaaccggaaagcgtacgtaacaagatcctttttgaaaacttaacacctttattccct
gatgaacgtttattgatggaagctggcaacggctctactgaagacgtcacatctcgtatc
attgaccttgttgctcctatgggtaaaggccaacgagcgttgatcgtttctcccccaaaa
gcgggtaaaactttcatgctgcaaaatatcgcaaacgccattactcgtaacagccctgaa
tgccacttaattgtgttacttattgatgaacgtcctgaagaagtaaccgaaatgtctcgt
accgtacgcggtgaagtggttgcctctacgtttgatgagccaccagctcgccatgttcaa
gtggctgaaatggtaattgaaaaagcaaaacgcttagttgaacataaacgtgacgtggtc
attctattagactccattactcgtttagcgcgtgcctacaacacagtcatcccctcatca
ggtaaagtattaacgggtggtgtggatgcaaacgcgctagaacgtccaaaacgtttcttt
ggtgcagcacgtaacatagaggaaggtggcagcttaacaatcatcgctactgcgcttgtc
gataccggttcaaaaatggatgaagttatctttgaagaattcaaaggtacgggtaactct
gaattacatcttgaccgtaagatcgctgagaagcgtacattccctgcgattaatattcgc
cgttcagggactcgccgtgaagacctactaacgtctgaagacgaactacaacgtatgtgg
attcttcgtaagttattaaaccctatggaagacgtggcagcgactgaattcttaatcgat
cgcctaaaagtaactcaaacaaacgatgagttctttgagtcaatgaaaggcaaaaataaa
taa
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