Marinomonas primoryensis: MP3633_0591
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Entry
MP3633_0591 CDS
T06705
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mpri
Marinomonas primoryensis
Pathway
mpri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MP3633_0591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpri03019
]
MP3633_0591
Messenger RNA biogenesis [BR:
mpri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MP3633_0591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QKK79327
UniProt:
A0A859CTC8
LinkDB
All DBs
Position
KMM3633:619230..620573
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AA seq
447 aa
AA seq
DB search
MIPSQEDLWFLPLGGTSEIGMNMNLYGHDGQWLMVDCGVSFNEPLTPDDLRTSEIVCADP
SFISEQKERLAGIVITHAHEDHVGALPFLWRRFKCPVYTTAFTAEVLRRKLLQVGLADDV
PVIVVNENETKKIGVFNVKWLALTHSVPEPFAMTIDTPAGRIFHTGDWKIDNQPIIGDGF
SSATFKALAKENILAMVCDSTNALKSGYSESESDCYRGLLQTIETEKNRVVVGCFSSNVA
RLVGLGRIAKETGRYLALIGRSLTNMVSAARVTGHWPDDLPIIDAAHLGYLPREEVLVVV
TGSQGESRATLNRLAADNCFDLSLEADDLVIFSAMRIPGNEPAIDCLAEQFKGRKIRTLQ
AHETDVTIHVSGHPCQEELKQLYTWVQPQLAIPCHGEPKHLDANAEVAKRSHVPQQLIGR
NGDLYQLAPSVKVQRQQVKVGRIALLR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgattccctcacaagaggatttatggtttctgcccttaggcggtaccagcgagatcggc
atgaacatgaatctttatggtcatgacggtcaatggttaatggtcgattgtggcgtgtct
tttaatgaaccgttaacgccggatgaccttcgtacttccgaaatagtgtgcgccgatcct
agctttattagcgagcagaaggagcgtctcgcaggcatcgttattactcatgctcatgaa
gatcatgtgggcgcattgccttttttatggcgccgttttaaatgtcctgtgtataccacg
gcgtttactgccgaagtgctgcgtcgaaaattgctgcaagtgggtttggccgacgacgtt
cctgtgattgtagtgaatgaaaacgaaaccaaaaaaattggtgtgtttaatgtgaaatgg
ttggcgctcacgcattctgtgccagagcctttcgcgatgaccatcgacacgccggcaggg
cgtatttttcatacgggagattggaaaattgataaccagccgattattggagacggtttt
tcatctgcgacgtttaaagccctagccaaagaaaatattttagcgatggtttgtgattca
accaacgcgttgaaaagcggttactccgaatccgaaagtgattgttatcgcggcttattg
caaaccatcgaaacagaaaagaatcgtgttgtggtggggtgctttagcagtaatgtggcg
cgtttagtgggattgggtcgaatcgccaaagaaacggggcgttacctcgcgttaattggt
cgatcgctaacgaacatggtcagcgccgccagagtaacaggtcattggcctgacgatttg
cctattatcgatgcggcgcatcttgggtatttaccaagagaagaagtgctggtcgtcgtc
accggaagtcaaggcgaatcaagagcgacgttaaaccgtttggccgcagacaattgtttt
gatttgagtcttgaagcagacgatttagtgattttcagcgccatgcgtattccgggcaac
gaaccagcgatagactgcttagccgaacaattcaagggtcgaaaaatacgcaccttacag
gctcatgaaaccgacgtaacgattcatgtgagtggtcatccttgccaagaggaattgaaa
cagctttatacttgggttcagccgcaactggccattccctgtcatggcgaaccgaagcat
ttggacgcgaacgcagaggtggcaaaacgcagtcatgtacctcaacaattgattggccga
aatggggatttgtaccaactggctccaagcgtgaaagtacagcgtcaacaggtgaaagtc
ggccgtattgcgctgttaagataa
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