| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
mpri Marinomonas primoryensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mpri00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MP3633_2007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mpri03019]
MP3633_2007
03400 DNA repair and recombination proteins [BR:mpri03400]
MP3633_2007
Enzymes [BR:mpri01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MP3633_2007
Messenger RNA biogenesis [BR:mpri03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MP3633_2007
DNA repair and recombination proteins [BR:mpri03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MP3633_2007
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
KMM3633:2127188..2128954
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| AA seq |
588 aa
MNLKKRTLSRLGHTEYRPLQEEAIDALCSGRDVLLAAPTGGGKSLVYQAAGLIRNGVAVI
VSPLLSLMSQQVDELNKKGIRAQFLNSTLNPGEQDDLVWALRHKHIDLLYLSPEKLVQPS
VIGFLHSFDIALFAIDEAHCISQWGNFFRPEYSQLGQLKAFFPDVPIIALTGTVDKETMT
TIQESLQLHDCLVMKNSFDRANINIQIAQKRKAKQQILYFLHHEVPGETGIIYCRSRKKT
EDIASWLSHLGLPSLSYHAAMTEEDKQRNHKTFAEQYGTIMVATTAYGMGIDIAHVRFVV
HLDLPNSPESYFQEVGRAGRDGKPAKSLLLYGLQDMLQAQQLAASQPLAAEKEIQHLGNL
FQILEGRGCRRQNLLSHFDENIPACLHCDRCLSTKSEQNMTTTSQKFLSLIYHTKGLQPF
ALLIQILLGKRTKAVSAIRAELLPLFGKGKELNEVQWKSVVRHLIAYEYIKIGISSIFTV
QITEKSRSVLQGKTQIIIPSEHYYPALQEDQLALDKVKWHKILAWKYEYGKINLSDTQLR
LICLHKPNSIASLSRLTGLSKENVADFSESLMKIIHESNPKEVSTSCL |
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| NT seq |
1767 nt +upstreamnt +downstreamnt
atgaacttaaagaaacgtacactttcccgtttaggccacaccgaatatcgtccactgcaa
gaagaagcaatagacgcattatgctctggtcgagacgttttactcgcggcgccaacaggc
ggcggaaaatctttggtttaccaagcggctggactcattagaaatggcgtcgcggtcatt
gtcagccctttgttatcccttatgtctcagcaagtggatgaattgaataagaagggcatt
agggcacagtttcttaattccacattaaaccctggcgaacaagatgatcttgtttgggcg
ttacgacataaacacattgatttgctgtatctatctccagaaaaactggttcaaccttcc
gtgatcggatttcttcatagttttgacattgctctgtttgccattgatgaagctcactgt
atttctcaatggggtaattttttcaggcctgagtacagtcaattaggtcagcttaaagct
tttttccctgatgtccctatcatcgcgcttaccggaacagtcgataaagagaccatgact
acgattcaagagtcgttgcaacttcatgactgccttgttatgaaaaacagcttcgaccgt
gccaacattaatattcaaattgcacaaaaaagaaaagccaagcaacaaatattgtatttt
ctgcaccatgaagtaccgggcgaaacaggaattatttattgccgctctagaaagaaaaca
gaagacattgctagttggctgagccatttaggactgcccagtttgagctaccacgcagca
atgacagaggaagataaacaaagaaaccataaaacctttgctgagcaatatggcaccatc
atggtcgcaaccacggcgtatggaatgggtattgatatcgcccatgtgcggtttgtagtg
catttggacttgcctaatagcccagaatcgtattttcaggaagtaggtcgggctggtcgc
gatggaaaaccagcgaaatcacttttgctgtatggccttcaagatatgttacaagctcag
cagcttgccgcttcacagcctttggcagcagagaaagaaattcaacacttaggcaactta
tttcaaatcttagaagggcgcggttgtaggcgacaaaatttactgtctcactttgatgaa
aacattcccgcttgccttcactgcgatcgctgcctttctacaaaatcagagcaaaatatg
acaacaaccagccaaaagtttttgtcactaatttatcacacaaaaggcttacagccattt
gcattactcatccaaattttactgggaaagagaaccaaagccgtaagtgccatcagagcg
gagttactcccattatttggcaaggggaaagagctaaacgaagtgcaatggaagtctgtt
gtgcgtcatttaatcgcctatgaatacatcaaaattggcatatctagtattttcacagtg
caaattactgaaaaatcacgaagtgtactgcaaggtaaaacgcaaattattattccaagc
gaacactattacccagcacttcaggaagaccaactggcgttagacaaggttaagtggcat
aagattttggcatggaaatacgaatacggaaaaataaacttgagcgacactcaacttagg
ttaatttgtttacataaacccaactctattgcttcattaagtcgcttaactgggctgtca
aaagaaaatgtggctgatttttccgaaagcttgatgaaaatcattcacgaatcgaatcca
aaagaggtcagtacatcatgcctatga |
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