Marinomonas primoryensis: MP3633_2393
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Entry
MP3633_2393 CDS
T06705
Name
(GenBank) ATP-dependent 23S rRNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mpri
Marinomonas primoryensis
Brite
KEGG Orthology (KO) [BR:
mpri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpri03009
]
MP3633_2393
Enzymes [BR:
mpri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MP3633_2393
Ribosome biogenesis [BR:
mpri03009
]
Prokaryotic type
rRNA helicases
MP3633_2393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
AAA_22
CMS1
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QKK81120
UniProt:
A0A859D271
LinkDB
All DBs
Position
KMM3633:2549679..2551061
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AA seq
460 aa
AA seq
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MTQFNHALTNLLPTKLTALLSDMGFTTFTPIQEQSLPPMIEGKDILAQAQTGSGKTLAFA
IALLLKINPRFFGVQALVMCPTRELADQVSKEIRKVARYQDNIKVLSLCGGMPFGPQIGS
LEHGAHIVVGTPGRLMEHLRKGTLKLNALNTLVLDEADRMLDMGFVDSIREVVELTPSNR
QTLLFSATYGDGIEAISTEFQNTPTTIKVEAQEDLKPNIEQFFVRSENKDKCETLLAALQ
HFEPRQAIVFCNTKVESQIVADWLVEHKVAAQAINGDLEQRQRDQVLVRFSNQSSCVLVA
TDVAARGIDVKEIDLVVNYDTTRDTDVHTHRIGRTGRAGAAGIAVNLVTSKDDYKVRDIE
TRFNTTANFIELEAIDPLYRLVPQKTTISFDAGRKNKLRPGDILGALTAGLGLDKSQVGK
IDIFDFHAYVSIDNAVAKNVVKEFENKKIKGRNIRARILR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaattcaatcacgctttaaccaaccttcttccaaccaaactgacagcattgctt
tctgacatggggtttacaacatttaccccaattcaagagcaaagtttgccaccaatgatt
gaaggtaaagacatccttgctcaggcacaaacaggcagtggtaaaacactcgcatttgcc
atcgctctcttactcaaaatcaatcctcgtttctttggtgttcaagctctggttatgtgt
ccgacacgtgagcttgcagaccaagtatcgaaagaaatacgcaaggtggcgcgctaccaa
gataatataaaggtgctaagcctgtgcggcggcatgccatttggcccacaaatcggttcg
ttagaacacggcgcccatattgttgttggcacaccggggcgcttaatggagcacctgcgt
aaaggcacactcaaactcaatgcactcaatacgctagtattggatgaagcagatcgtatg
ctggacatgggcttcgttgatagcatccgcgaagtcgttgaattaacaccaagcaaccgt
cagacgcttcttttctctgcaacttatggcgatggtattgaagcgatcagtactgaattc
caaaataccccaactaccattaaggtcgaagctcaagaagaccttaaaccaaatatcgaa
caatttttcgttcgcagtgaaaacaaagacaaatgcgaaaccttattagcagcgttgcaa
cattttgagcctcgccaagccattgttttctgtaataccaaagtggaatcacaaatcgtt
gcagactggttagtcgagcacaaagtcgcggctcaagcaatcaatggcgaccttgagcaa
agacaacgtgatcaagtattagtgcgttttagtaaccaaagcagctgtgtcttggttgcg
accgatgtagccgctcgtggtattgatgtaaaagaaattgaccttgtagtgaactacgac
actacgcgcgataccgatgtgcatactcaccgtataggtcgtactggcagagcgggtgct
gcaggcatcgctgtcaatcttgttacctcaaaagacgattacaaagtgcgcgacattgaa
actcgctttaacacaacggcaaactttattgagcttgaagccattgatccgctttatcgt
ttagtccctcaaaaaaccactatttcttttgatgctggccgtaaaaacaaacttcgccca
ggagacatacttggcgcgctaacagcgggtttaggtttggataagtctcaagtcggcaag
attgatattttcgatttccacgcctatgtatcaatcgataatgcggtggcaaaaaacgtc
gttaaagaattcgaaaacaaaaaaatcaaaggcagaaacatccgcgctcgcattctaaga
taa
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