Microbacterium proteolyticum: AB0870_02430
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Entry
AB0870_02430 CDS
T11415
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mprl Microbacterium proteolyticum
Pathway
mprl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mprl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB0870_02430 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mprl03021
]
AB0870_02430 (rpoC)
03400 DNA repair and recombination proteins [BR:
mprl03400
]
AB0870_02430 (rpoC)
Enzymes [BR:
mprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB0870_02430 (rpoC)
Transcription machinery [BR:
mprl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB0870_02430 (rpoC)
DNA repair and recombination proteins [BR:
mprl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB0870_02430 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCX30941
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Position
525685..529560
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AA seq
1291 aa
AA seq
DB search
MLESTTFDQLRIGLATADDIRRWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEDARHRDLATQENNIRLELKTLGDRRDSRIAARLAKLEEE
LAALEAEGAKADQKKKVKDAAEKDMTSIRKNADEQIAKLERVWEDFRTLEVGALKPEDDV
FHELQDRFGQYFEAHMGAESIKRRLETFDLAAESESLHLQISEGKGQRKIRAIKRLKVVN
SFLQTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERYR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTLKEGAVGEGR
AFGSVGEAILAKDEGTLDLQAKARIRIPGLTFLEGQAPEGYEKHGLVDASLGQAIFNDTL
PKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFYWATRSGVTVALSDIL
TPPNKGEIVAGYEKQAAKVQAQYEKGLTTDAERRQELIKIWTEATDAVQKAMRDNFPADN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTSKGLELPIAAVDSTGALIKDANVE
NSVFARTLAAAVVDAQGTVLAEAGDDVGDVLINKLVEGGVESIKVRSVLTCESAVGVCAK
CYGRSLATGKIVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGRITIDETDKAKKVILTPDNGDEPVVYPVLKRATLLVEDGQHVKV
GEPLQVGTLDPKEVMRVQGAREVQKYLVNGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGDTDLLPGELVDFKRYQTINRETVGEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVTVEATEEAKSERYPNRI
FASDGAYSDADLSYVDFDSFSTDDFTPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaatcaaccactttcgatcagcttcgtatcggcctggccaccgccgacgacatc
cgtcgttggtctttcggtgaggtcaagaagcccgaaaccatcaactaccgcaccctgaag
cccgagaaggacggtctgttcggcgagcagatcttcggaccctcgcgcgactgggagtgc
gcgtgcggcaagtacaagcgcgtccgcttcaagggcatcgtctgcgagcgctgcggcgtc
gaggtcaccaagtcctcggtccgtcgcgagcgcatgggccacatcgagctcgccgcgccc
gtcacccacatctggtacttcaagggcgtgccctcgcgcctcgggtacctgctggacatg
gctccgaaggacctcgagaaggtcatctacttcgccgcctacatggtcatctcggtcgac
gaggatgctcgtcaccgcgacctggcgacgcaggagaacaacatccgtctcgagctgaag
acgctcggcgaccgtcgcgactcgcgcatcgccgctcgccttgcgaagctggaggaggag
ctcgcggccctcgaggccgagggtgccaaggcggaccagaagaagaaggtcaaggacgcc
gccgagaaggacatgacctcgatccgcaagaacgcggacgagcagatcgccaagctcgag
cgcgtgtgggaggacttccgcacgctcgaggtcggcgccctgaagcccgaggatgacgtc
ttccacgagctccaggaccggttcggtcagtacttcgaggcccacatgggtgcggagtcg
atcaagcgtcgcctggagaccttcgacctggccgccgagtcggagagcctgcacctgcag
atctccgagggcaagggccagcgcaagatccgcgcgatcaagcgtctgaaggtcgtcaac
tcgttcctgcagaccggcatgtcgccggcctcgatggtgctcgacgtcgttccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccgtttcgccacctccgacctg
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctccgtcgcctgatcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgccccgtcacgggtaccggcaaccgcgccctgaag
tccctgagcgacatgctcaagggaaagcagggtcgtttccgccagaacctgctcggcaag
cgcgtggactactcgggtcgttcggtcatcatcgtcggaccccagctgaagctccaccag
tgcggtctgcccaagcagatggcgctcgagctcttcaagccgttcgtgatcaagcgcctg
atcgacctcggtcactcgcagaacatcaaggccgccaagcgcgccgtcgagcgctaccgt
cccgaggtctgggacgtgctggaagagatcatccgcgagcgtcccgtgctgctgaaccgt
gcacccaccctgcaccgtctcggcatccaggcgttcgagccccagctcgtcgagggcaag
gcgatccagctgcacccgctcgtctgcgcggcgttcaacgccgacttcgacggtgaccag
atggccgtccacctgccgctgtccgtcgaggcccaggccgaggcgcgcgtgctcatgctc
gcgtcgaacaacatcctgaagccgtccgacggccgtccggtgaccctgccctcgcaggac
atgatcatcggcctccaccacctcaccaccctcaaggagggtgccgtgggcgagggccgt
gcgttcggttcggtgggcgaggcgatcctggccaaggacgagggcaccctcgacctgcag
gccaaggcgcgcatccgcatccccggcctcacgttcctcgagggccaggcgcccgagggc
tacgagaagcacggtctcgtggatgcctcgctcggtcaggcgatcttcaacgacacgctc
cccaagggctacccgttcgtccgcgagcaggccgacaagggcaagctgtcgcagatcgtg
aacaagctggccgaggagtaccccaaggtcgaggtcgcggcatcgctcgaccggatcaag
gacgccggtttctactgggccacgcgttcgggtgtgacggtcgcgctgagcgacatcctc
acgcccccgaacaagggcgagatcgtcgcgggctacgagaagcaggccgcgaaggtccag
gcgcagtacgagaagggtctcaccaccgacgccgagcgtcgccaggagctcatcaagatc
tggaccgaggccacggatgccgtccagaaggcgatgcgcgacaacttcccggccgacaac
accatcaaccgcatggtctcgtcgggcgcccgtggtaactggctgcagatccgcaacatc
gcgggtatgcgtggtctggtgaacaacccgaagggtgagatcatcccgcgtccgatcatc
tcctcgtaccgcgagggtctgtcggtcgccgagtacttcatcgcgacgcacggtgcccgt
aagggtctggccgacacggctctccgtacggccgactcgggttacctcacgcgtcgtctg
gtggacgtctcgcaggacgtcatcatccgcgaggaggactgcggtacgtcgaagggcctc
gagctcccgatcgccgcggtcgactcgaccggcgctctcatcaaggacgccaacgtcgag
aactcggtcttcgctcgtaccctggccgcggccgtcgtcgatgcccagggcacggtgctg
gccgaggccggcgacgacgtgggcgacgtgctcatcaacaagctggtcgagggcggtgtc
gagtcgatcaaggtccgctcggtcctcacgtgcgagtcggccgttggtgtctgcgcgaag
tgctacggccgttcgctcgccaccggaaagatcgtcgacatcggcgaggccgtcggcatc
atcgcggcccagtcgatcggtgagcccggtacccagctgacgatgcgtaccttccacacc
ggtggttccgcgtcggccgacgacatcacgcagggtctgccccgcgtgcaggagctgttc
gaggcccgtacccccaagggtgcgtcgccgatcgccgaggccgacggccgcatcacgatc
gacgagaccgacaaggccaagaaggtcatcctcacgcccgataacggcgacgagcccgtg
gtctacccggtcctgaagcgtgcgaccctcctcgtagaggacggccagcacgtcaaggtc
ggcgagcccctccaggtcggaacgctcgaccccaaggaggtcatgcgcgtgcagggtgcc
cgcgaggtgcagaagtacctcgtgaacggcgtccagggcgtgtaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcgcaaggtcaccgtc
gtcgaccacggcgacaccgacctgctgcccggcgagctggtggacttcaagcgctaccag
accatcaaccgcgagacggtcggcgagggcaagcgtcccgcgtcgggtcgtcccgagctg
atgggtatcacgaaggcgtcgctcgcgaccgagtcgtggctgtcggcggcatcgttccag
gagaccacccgcgtcctgacgcaggcggccatggagggcaagagcgacccgctcgtcggc
ctcaaggagaacgtcatcatcggaaagctcatccccgccggaaccggtcttgcgaagtac
cgcaacgtcacggtcgaggcgacggaggaggccaagagcgagcggtaccccaaccgcatc
ttcgcctcggacggcgcctacagcgacgccgacctgagctacgtcgatttcgacagcttc
tcgacggacgacttcacgcccggtacgtataactga
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