Microbacterium proteolyticum: AB0870_04850
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Entry
AB0870_04850 CDS
T11415
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mprl Microbacterium proteolyticum
Pathway
mprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB0870_04850 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mprl03021
]
AB0870_04850 (rho)
03019 Messenger RNA biogenesis [BR:
mprl03019
]
AB0870_04850 (rho)
Transcription machinery [BR:
mprl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AB0870_04850 (rho)
Messenger RNA biogenesis [BR:
mprl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB0870_04850 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
PIP5K
AAA_25
NACHT
Spore_III_AA
AAA_22
VWA_2
Mor
Motif
Other DBs
NCBI-ProteinID:
XCX31412
LinkDB
All DBs
Position
1052896..1054968
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AA seq
690 aa
AA seq
DB search
MESISETQPVDAPEGADIPTEEQSAAPADETLFDTPVDAEGADAPADEEPAAEQAPAEEA
APAVDDAPVEAPADDAAPADAAPADAPAADTAPAVEPAAEEAAAAPTEEPAAEEAPAKPA
RAPRKRAPRRAKSAPAEEAPAEAATTEVAAVEAAATEAETPAETVEAPVEETPAAPAEAP
EVVADAPAVEEAATETPEAEESAETAAPAADGESADESTETPSRSRSRSRSRNRNRNKVE
NADAAAPAANAPAPAEESEAPAQNGQQAQQQNQANSRNRQRNKRRGQPTTGDEFEGEIGE
DDVLIPIAGILDVLDNYAFVRTTGYLPGPSDVYVSLGQVKKYNLRKGDAVVGSIKQPREN
EQSSRQKYNALVKVDSINGLSVEDAAARVEFGKLTPLYPQERLRMETAPEKLTQRLIDLV
APVGKGQRGLIVAPPKAGKTIVLQQIANAIAHNNPEVHLMVVLVDERPEEVTDMQRTVKG
EVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNLSAPTSGRVL
TGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDDVIFEEFKGTGNSELRL
NRQLADKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLDPQQALEVVLGKLKE
TQSNVEFLVQMQKSIPAPARGDNGHDNGIR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagacccagcccgttgacgcgcccgagggcgctgacatccccacc
gaggagcagtccgccgctcccgccgacgagacgttgttcgatacgcccgtcgacgccgag
ggcgccgacgcccccgcggacgaggagcctgccgccgagcaggcacccgccgaagaggcc
gccccggccgtggacgacgcgcccgtcgaggctccggccgatgacgccgcgcctgccgat
gccgcgcctgccgacgcgcccgccgccgacaccgctcccgccgtggagccggccgccgaa
gaggctgctgcggctccgacggaggagcccgccgccgaagaggcgcccgccaagcccgcc
cgcgccccccgcaagcgcgccccgcgccgtgcgaagagcgcgcccgccgaggaggcgccc
gccgaggccgccaccaccgaggtcgccgcggtcgaggccgccgccaccgaggccgagacc
ccggccgagacggtcgaggctccggtcgaggagacccccgccgcccccgcggaggcgccc
gaggtcgtcgccgacgcgcccgccgtcgaagaggccgccaccgagacccccgaggccgag
gagagcgccgagaccgcagcccccgccgccgacggcgagtcggcggacgagtcgaccgag
acgccgtcgcgcagccgcagccgcagccggtcgcgcaaccgcaaccgcaacaaggtcgag
aacgccgacgccgccgccccggcggcgaacgcccccgcccccgccgaagagtccgaggcg
cccgcgcagaacggccagcaggcccagcagcagaaccaggcgaacagccggaaccgccag
cgcaacaagcgccgcggtcagcccaccaccggtgacgagttcgagggcgaaatcggcgag
gacgacgtcctgatcccgatcgccggcatcctcgacgtgctcgacaactacgcgttcgtg
cgcaccacgggctacctccccggtccgagcgacgtgtacgtctcgctcggccaggtgaag
aagtacaacctgcgcaagggcgacgcggtcgtcggctcgatcaagcagccgcgcgagaac
gagcagtcgagccgtcagaagtacaacgccctcgtgaaggtcgactccatcaacgggctg
tcggtcgaggacgccgccgcgcgcgtcgagttcggcaagctgacgccgctgtacccgcag
gagcgcctccgcatggagacggcccccgagaagctcacgcagcgtctcatcgacctcgtc
gccccggtgggcaagggtcagcgcgggctcatcgtggcgcccccgaaggcggggaagacc
atcgtgctgcagcagatcgccaacgcgatcgcgcacaacaaccccgaggtccacctcatg
gtcgtgctcgtcgacgagcgccccgaagaggtcaccgacatgcagcgcacggtcaagggc
gaggtcatcgcctccaccttcgaccggcccgcggaggaccacaccacggtcgccgagctc
gccatcgagcgcgcgaagcgtctcgtcgagctcggtcgcgacgtggtcgtgctgctcgac
tcgatcacccgtctcggccgcgcctacaacctgtcggcgcccacctcgggccgcgtcctc
accggtggcgtggatgcgtcggcgctctacccgccgaagcgcttcttcggcgcggcgcgc
aacatcgagaacggcggatcgctcacgatcctggccaccgctctggtggagaccggctcc
aagatggacgacgtgatcttcgaggagttcaagggcaccggcaacagcgagctgcgtctg
aaccgccagctcgccgacaagcgcatcttcccggccgtcgacgtcaacgcgtcctcgacc
cggcgcgaagagatgctgctgtcgccggacgaggtcaagatcacctggaagctgcgtcgt
gccctcgcgggtctcgacccccagcaggccctcgaggtcgtgctcggcaagctcaaggag
acgcagtccaacgtcgagttcctcgtccagatgcagaagtcgatcccggctcccgcgcgc
ggagacaacgggcacgacaacggcatccgctga
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