Microbacterium proteolyticum: AB0870_06420
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Entry
AB0870_06420 CDS
T11415
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mprl Microbacterium proteolyticum
Pathway
mprl03030
DNA replication
mprl03430
Mismatch repair
mprl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB0870_06420 (dnaE)
03430 Mismatch repair
AB0870_06420 (dnaE)
03440 Homologous recombination
AB0870_06420 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mprl03032
]
AB0870_06420 (dnaE)
03400 DNA repair and recombination proteins [BR:
mprl03400
]
AB0870_06420 (dnaE)
Enzymes [BR:
mprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB0870_06420 (dnaE)
DNA replication proteins [BR:
mprl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB0870_06420 (dnaE)
DNA repair and recombination proteins [BR:
mprl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB0870_06420 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XCX31704
LinkDB
All DBs
Position
1374601..1378113
Genome browser
AA seq
1170 aa
AA seq
DB search
MAADSFVHLHVHSEYSMLDGAARIGPMVQEAVKLGMPAIAVTDHGNTFAAYEFYKTAKDA
GIKPIIGIEAYVTPGTHRSDKSRVRWGTPEQQSDDVSGSGAYTHMTLLSETTEGMHNLFR
LSSRSSMEGYYFKPRMDRELLQTYSKGLIATTGCPSGEVQTRLRLGQYDAAKAAAAEFQD
IFGKDNYFAEIMDHGLSIERRIMSDLLRLAKELDIPLLGTNDLHYTHQHDATSHAALLCV
QSGSTLDDPKRFKFDGDGYYVKSAAEMRQVFRDNPEACDNTLLIAERCDVEFNTSANYMP
RFPVPDGETEDSWMIKEVETGLHDRYPGGIPDEVRKQAEYETGVILQMGFPGYFLVVADF
INWAKDHGIRVGPGRGSGAGSMVAYAMKITDLDPLQHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIQYVTEKYGDERVAQIVTYGTIKAKQALKDAGRVLGFPFSMGDKLTKAMPPAV
MGKDMPLDGMFNPEHPRYKEASEFRTLIETDPEAKTVFDTALGLENLKRQWGVHAAGVIM
SSEPLIDIIPIMRREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIINDALDNIEANRG
HPLVLEDLDLDDAASYELLARGDTLGVFQLDGGPMRSLLRLMRPDNFEDISAVLALYRPG
PMGVNSHINYALRKNKQQEIEPIHPELEEPLADILDTTYGLIVYQEQVMAVAQRVAGYTL
GQADLLRRAMGKKKKSELDKQKEIFFGGMTERGFGDVAQQTLWKVLESFADYAFNKAHTA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMAVYLNECRRMGIKVLPPDVNESIRF
FAAVGEDIRFGLGAVRNVGTNVVDGIVAARQDAKYTSFHDFLSKVPLHVANKRTVESLIK
AGAFDSLGSTRRALVEIHEDACEGAVLDKRREANGEVGFDFDSLWDEPQQDAKVPERPEW
TKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASTSIHDLLASDDVQDGDQVTVAGLLTS
VQHRVAKQSGNPYGMVTVEDFNGEVTVMFMGKTYAEFAPVLQADSILVVRGRVSRRDDGL
NLHAQSAFVPDLEGFDAMSGLTLVVPEQRANETLVGELAQMLRRHAGDTEVTLKLHKGGT
AKVFEVPMPVRVTADLFGELKGLLGPNCLG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcagactccttcgttcaccttcacgtgcacagcgagtactccatgctcgatggg
gccgcgcgcatcggacccatggtgcaggaggccgtgaaactgggcatgccggcgatcgcg
gtgaccgatcacggcaacaccttcgccgcctacgagttctacaagacggcgaaggatgcc
ggtatcaagccgatcatcggcatcgaggcctacgtgactcccggcacccatcgctccgac
aagtcgcgcgtgcggtgggggacgcccgagcagcagagcgacgacgtatccggttccggc
gcgtacacgcacatgacgctgctgtccgagaccaccgagggcatgcacaacctgttccgg
ctgtcgtcgcggtcgagcatggagggctactacttcaagccccgcatggaccgcgagctg
ctgcagacgtacagcaagggcctcatcgcgacgaccgggtgtccctcgggcgaggtccag
acgcgcctgcgcctggggcagtacgacgcggccaaggcggccgccgccgagttccaggac
atcttcggcaaagacaactatttcgccgagatcatggaccacggtctgtcgatcgagcgc
cgcatcatgtcggatctgctgcggctcgccaaagagctcgacatcccgctcctgggcacg
aacgacctccactacacgcaccagcacgacgccacgagtcatgcggctctgctgtgcgtg
cagtccggctcgacgctcgacgaccccaagcgcttcaagttcgacggcgacggctactac
gtcaagtccgccgccgagatgcggcaggtgttccgcgacaaccccgaagcgtgcgacaac
acgctgctgatcgccgagcgatgcgacgtcgagttcaacacctcggccaactacatgccc
cgcttcccggtccccgacggcgagaccgaagacagctggatgatcaaggaggtcgagacc
gggctccacgaccggtacccgggcggcatccccgacgaggttcgcaagcaggccgagtac
gagaccggcgtcatcctccagatggggttcccgggatacttcctcgtcgtcgccgacttc
atcaactgggccaaggaccacggcatccgcgtgggaccgggccgcggttcgggcgccggc
tcgatggtcgcgtacgcgatgaagatcaccgacctcgacccgctgcagcacggcctcatc
ttcgagcgattcctgaaccccgaccgcgtgtcgatgcccgacttcgacgtcgacttcgac
gaccgtcgtcgcggcgaggtcatccagtacgtgaccgagaagtacggcgacgaacgcgtc
gcgcagatcgtcacatacggcacgatcaaggccaagcaggcgctcaaggacgcgggccgc
gtcctggggttcccgttcagcatgggcgacaagctcaccaaggccatgccgcccgcggtg
atgggcaaggacatgccgctggacggcatgttcaaccccgagcacccgcggtacaaggag
gcgagcgagttccgcacgctgatcgagaccgaccccgaggccaagacggtgttcgacacc
gccctgggactcgagaacctcaagcgccagtggggtgtgcacgccgccggcgtcatcatg
tcgagcgagcctctgatcgacatcatcccgatcatgcgccgcgagcaggacggccagatc
gtcacgcagttcgactaccccgcgtgcgagtccctcgggctcatcaagatggacttcctg
gggctgcgcaacctcacgatcatcaacgacgcgctcgacaacatcgaggcgaaccgcgga
caccccctcgtgctggaagacctcgacctcgacgacgcggcatcctacgaactcctcgcg
cgcggcgacacgctcggcgtcttccagctcgacggcggacccatgcggtcgctgctgcgc
ctcatgcgccccgacaacttcgaggacatctcggcggtcctggcgctctaccgtcccggc
ccgatgggcgtgaactcgcacatcaactacgcgctgcgcaagaacaagcagcaggagatc
gagccgatccaccccgagctggaagagccgctcgccgacatcctggacaccacgtacggc
ctgatcgtctaccaggagcaggtcatggccgtggcccagcgggtcgccggctacaccctc
ggtcaagccgacctcctccggcgcgcgatgggcaagaagaagaagagcgagctcgataag
cagaaagagatcttcttcggcggcatgaccgagcgcggcttcggcgacgtggcgcagcag
acgctgtggaaggtgctcgagtcgttcgccgactacgccttcaacaaggcacacaccgcc
gcctacggtctggtgtcgtactggacggcgtatctgaaggcccactatcccgccgagtac
atggccgccctgctcacgagcgtcggcgattccaaggacaagatggcggtgtacctcaac
gagtgccgccgcatgggcatcaaggtgctcccgcccgatgtgaacgaatcgatccggttc
ttcgctgccgtcggcgaagacatccgcttcggtctgggcgccgtccgcaacgtcggcacc
aacgtcgtcgacgggatcgtcgcggcgcgtcaggatgccaagtacacctcgttccacgac
ttcctgtccaaggtgccgctgcacgtggccaacaagcgcacggtggaatccctcatcaag
gcgggggcgttcgactcgctcgggtccacgcgccgcgcgctcgtcgagatccacgaggac
gcctgcgaaggggccgtgctcgacaagcgccgcgaggcgaacggcgaggtgggcttcgat
ttcgactcgctgtgggacgagccgcagcaggacgcgaaggtccccgaacgtccggagtgg
accaagaaggacaagctggcgttcgagcgggagatgttggggctctacgtctcggaccac
ccgctggccgggctcgaggtgcccctcgccaagcacgcgtcgacgtcgatccatgacctg
ctcgcctccgacgacgtgcaggacggtgaccaggtcaccgtcgcgggtctgctcaccagc
gtccagcaccgcgtcgcgaagcagagcggcaacccctatggcatggtcaccgtagaggac
ttcaacggcgaggtgaccgtgatgttcatgggcaagacctacgccgagttcgctcccgtg
ctgcaggcggactcgattctcgtcgtccgcggccgcgtgtcgcgtcgcgacgacggtctg
aacctccacgcgcagtcggcgttcgtccccgacctcgagggcttcgacgcgatgagcggt
cttacactggtcgtccccgagcagcgggcgaacgaaacgctcgtcggcgaactcgcccag
atgctgcgtcggcacgccggcgacacggaggtgactctcaagctccacaaaggtggcacc
gccaaggtcttcgaggtgcccatgccggtgcgggtgaccgctgatctcttcggagagctc
aagggcctgctcggcccgaactgcctgggctga
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