Micromonospora profundi: Q3V37_07525
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Entry
Q3V37_07525 CDS
T09358
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mprn
Micromonospora profundi
Pathway
mprn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mprn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q3V37_07525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mprn03400
]
Q3V37_07525
Enzymes [BR:
mprn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Q3V37_07525
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Q3V37_07525
DNA repair and recombination proteins [BR:
mprn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Q3V37_07525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-TFIIB
NFACT_N
Zn-ribbon_8
zf-RRN7
Motif
Other DBs
NCBI-ProteinID:
WLS47083
LinkDB
All DBs
Position
complement(1629511..1630371)
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AA seq
286 aa
AA seq
DB search
MPELPEVEALAGYLRQRAVGRRVDRLEIAAISALKTYDPAPSAVAGRAVVDARRHGKFLD
VLIEGDLHLVVHLARAGWLHYREAFPSTTPLRPGKGPIAVRVRLDDGSGFDLTEAGTQKK
LAAYLVTDPAAVPGVAKLGPDALAADLPTFTERLRSRRGQVKGVLTDQSVLSGVGNAYSD
EILHAAKLSPFAITDRLTDAQLAALHAATRQVLGDAVERSVGQRAAELKGEKRAGLKVHA
RNGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactaccggaggttgaggcgctcgcgggttacctgcgacagcgcgcggtgggg
cggcgtgtcgaccggctggagatcgccgcgataagcgccctgaagacgtacgacccggca
ccgtccgcggtcgccggccgggctgtcgtcgacgcccgccggcacggcaagttcctcgac
gtactcatcgagggtgatctgcatctcgtggtccacctggcacgggccggctggctgcac
taccgggaggcgttcccgtccacgacgccgctgcgccccggcaagggtccgatcgcggta
cgggtccgcctcgacgacggctccggcttcgacctgaccgaggccggcacccagaagaag
ctggccgcgtacctggtcaccgaccctgcggcggtgcccggcgtggccaagctcggcccg
gatgcgcttgccgccgacctgcccacgttcaccgagcggctgcgcagccggcgcgggcag
gtcaaaggggtgctgaccgaccagtcggtgctctccggggtgggaaacgcgtactccgat
gagatcctgcacgccgcgaagctgtctccgttcgcgatcaccgaccggctcacggacgcc
cagctcgccgccctgcacgcggcgacgcggcaggtgctcggcgacgcggtcgagcgttcc
gtcgggcagcgcgcggcggagctgaagggtgagaagcgcgccggcctgaaggtgcacgcc
cgcaacgggctgccctgcccggtgtgcggggacacggttcgggaggtgtcgttcgccgat
tcgagcctgcagtactgcccgacgtgccagaccggcggcaaaccgctcgctgaccgacgg
ttgtcccgactcgtacggtga
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