Micromonospora profundi: Q3V37_10325
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Entry
Q3V37_10325 CDS
T09358
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mprn
Micromonospora profundi
Pathway
mprn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mprn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q3V37_10325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mprn03021
]
Q3V37_10325
03400 DNA repair and recombination proteins [BR:
mprn03400
]
Q3V37_10325
Enzymes [BR:
mprn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q3V37_10325
Transcription machinery [BR:
mprn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q3V37_10325
DNA repair and recombination proteins [BR:
mprn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q3V37_10325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WLS47583
UniProt:
A0AAJ6HYT8
LinkDB
All DBs
Position
2226644..2230537
Genome browser
AA seq
1297 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDAESRHRDLSTIENEILAEKRQSENSRDSEIEKRAAKLEAD
LAELEAEGAKADVRRKVKEGGEREMRQIRDRAQREIDRLDEVLDTFRKLEPKQLVTDELL
YRELRDRFGEYFTGSMGAEAIKALVQNMDLDAEAESLRETIRSGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPKLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHRTAGEKVGEG
RSFSSDAEARMAFDNRELHLQALVKIRLRGVTEVDNGAGAEPWTAPEGWVEGDPLTVETT
LGRVLFNETLPQGYRFVNYEIRKGQLSAIVNDLAERFPKVALAATLDGLKEAGFHWATWS
GVTIGMEDVIAPPRKAEILAKYEKEADRIDKQYQRGLMTAEERRGELIEIWTKATNEVAK
EMDTALPQENPLWKMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPIKASYREGLSVL
EYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMQIGERLED
GRLVVHEHAETSVHARTLADDIKGPDGTVVAERGQDINSIGVDKIVAAGVETVRVRSVLT
CESKLGVCGACYGRSLPTGKSVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQ
GLPRVQEIFEARVPKGKAPIADTPGRIRIEDGERSRKIIVVPDDGSEEIVYDKISKRVRL
RTHDGGHVAVGEKLTEGTIDPHELLRIMGPRAVQVHLTSEVQEVYRSQGVLIHDKHIEII
IRQMLKRVTVIDSGSTEFLPGVLVDRALFESENRRLVSEGGEPAAGRPVLMGITKASLAT
DSWLSAASFQETTRVLTDAAINSRSDSLVGLKENVIIGKLIPAGTGISKYRNVRVEPTEE
AKAKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcgcattggtctcgccaccgccgacgacatc
cgtcagtggtcgcacggcgaggtcaagaagcctgagaccatcaactaccgcaccctgaag
ccggaaaaggacgggctcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggtaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgctccaaggtccgtcgtgagcggatggggcacatcgagctcgccgctccg
gtgacccacatctggtacttcaagggcgtgccgagccggctgggttacctgctggacctc
gcccccaaggatctcgaaaagatcatctacttcgcctcgtacgtcgtgacgagcgttgac
gccgagtcgcgtcaccgtgacctctcgaccatcgagaacgagatcctcgcggagaagcgg
cagtccgagaacagccgcgactcggagatcgagaagcgggccgccaagctcgaggccgac
ctggccgagctggaggccgagggtgccaaggcggacgtccggcgcaaggtcaaggagggc
ggagagcgcgagatgcgccagatccgcgaccgggcccagcgcgagatcgaccgcctggac
gaggtcctggacaccttccgcaagctggagccgaagcagctggtcaccgacgagctgctc
taccgcgagctgcgcgaccgtttcggtgagtacttcaccggctcgatgggcgccgaggcg
atcaaggcgctggtccagaacatggacctcgacgccgaagccgagagcctgcgcgagacc
atccgctccggcaagggccagcggaagatccgggcgctcaagcggctcaaggtcgtggcg
gcgttcctgaacacccgcaactcgccgctcggcatggtgctggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacctcggacctg
aacgacctgtaccgccgcgtgatcaaccggaacaaccgcctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgtcgcggtcggccggtcaccggtccgggtaaccgtcccctcaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctgggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgaagctcaagctgcaccag
tgcggtctgcccaagcagatggcgttggagctgttcaagccgttcgtcatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgtcagcgc
ccggtcgtgtgggacgtgctggaagaggtcatcggcgagcaccccgtgctgctcaaccgg
gcgccgaccctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctggtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggcggtgcacgtgccgctgtccgccgaggcccaggccgaggcacggatcctgatgctg
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgcccacccaggac
atggtcatcggtctctaccacctcacccaccgcaccgccggtgagaaggtgggtgagggc
cggtcgttcagttcggacgccgaggcgcggatggcattcgacaaccgcgagttgcacctg
caggcgctcgtgaagatccgcctgcgtggcgtgaccgaggtcgacaacggcgccggtgcc
gagccgtggaccgccccggagggctgggtcgagggtgacccgctgaccgtggagaccacg
ctgggccgggtgctgttcaacgagacgctgccgcagggctaccgcttcgtgaactacgag
atccgcaagggtcagctctccgcgatcgtcaacgacctcgccgagcgcttccccaaggtg
gccctcgcggccaccctggacggactcaaggaggccggtttccactgggccacctggtcc
ggcgtgacgatcggcatggaggacgtcatcgctccgccgcgcaaggcggagatcctggcg
aagtacgagaaggaagccgaccggatcgacaagcagtaccagcgtggtctgatgaccgcc
gaggagcgtcgcggcgagctcatcgagatctggaccaaggcgaccaacgaggtcgccaag
gagatggacaccgcgctgccgcaggagaacccactgtggaagatgatcaactcgggtgcc
cgcggtaacctgctccagctccggcagatcgcggctatccgtggtctggtggccaacccc
aagggcgagatcatcccgcggccgatcaaggccagctaccgggagggtctgtccgtgctg
gagtacttcatctccacgcacggtgcccgtaagggtctcgccgacaccgcgctgcggacc
gccgactcgggttacctgacccgtcgtctggtggacgtctcccaggacgtgatcatccgc
gaggaggactgcggcaccgaccgggcgatcccgatgcagatcggcgagcgcctggaggac
ggccggcttgtcgttcacgagcacgccgagaccagcgtgcacgcccgtaccctggccgac
gacatcaaggggccggacggcaccgtcgtcgccgagcggggtcaggacatcaactccatc
ggcgtcgacaagatcgtcgccgctggcgtggagacggtccgggtgcgcagcgttctcacc
tgcgagtcgaagctgggtgtctgcggtgcctgctacgggcggtcgctgccgaccggcaag
agcgtggacgtcggcgaggcggtcggcatcatcgccgcccagtcgatcggtgagcccggt
acgcagctgacgatgcgtaccttccacaccggtggcgtcgcgggtgaggacatcacccag
ggtctgccgcgtgtccaggaaatcttcgaggcccgggtcccgaagggtaaggcgcccatc
gccgacacccccggccggatccgcatcgaggacggcgagcgctcgcggaagatcatcgtg
gtgccggacgacggcagcgaggagatcgtctacgacaagatctccaagcgggtgcgtctg
cgtacccacgacggtggtcacgtcgcggtcggcgagaagctcaccgagggcaccatcgac
ccgcacgagcttctgcggatcatgggtccgcgggcggtccaggtccacctgaccagtgag
gtccaggaggtctaccgctcgcagggcgtgctcatccacgacaagcacatcgagatcatc
attcgccagatgctcaagcgggtgacggtcatcgactccggctcgacggagttcctgccg
ggtgtgcttgtcgaccgggcgctgttcgagtcggagaaccgccggctcgtgtcggagggt
ggcgagcccgccgccggccgcccggtgctgatgggtatcaccaaggcatcgctggccacc
gactcctggctctccgcggcctccttccaggagaccacccgggtgctgaccgacgctgcg
atcaactcgcgcagcgactcgctggtcggcctcaaggagaacgtgatcatcggtaagctc
atcccggccggtacgggcatcagcaagtaccgcaacgtccgggtggagccgaccgaggag
gccaaggcgaaggtctactcgatgaccggttacccggagaccgactacgggttcgggccg
gccagcgggcaggctgtgccgctggacgacttcgacttcgggtcgtaccgctaa
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