Micromonospora profundi: Q3V37_23070
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Entry
Q3V37_23070 CDS
T09358
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mprn
Micromonospora profundi
Pathway
mprn00040
Pentose and glucuronate interconversions
mprn01100
Metabolic pathways
mprn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mprn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Q3V37_23070
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q3V37_23070
Enzymes [BR:
mprn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Q3V37_23070
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WLS44262
UniProt:
A0AAJ6HQE0
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Position
5126710..5128059
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AA seq
449 aa
AA seq
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MRRTLTVATLVALLLGAAPAMAAGRPDSVDRLSWAARQLGRQALPERDGWAAEGAGTTGG
STAAPERTRVVRDRAELVAALGGDNASNATDATPKLIYVDGVVDGFEGPDGTPLSCADLA
DPGYRLDAYLVAYDPAVWGRVTPAGPLEEARVRSVANQTRQTQINVGPNTTIIGLRGARL
TGLTLMIDRASNVIVRNLTFVDARDCFPAWSPTDGDTGNWNSQYDQISVRRSEHVWIDHN
TFTDGDNPDSAQPTYFGRPYQVHDGSLDVTHTASLVTASWNRFTGRDKLMLIGSSNTVGP
DVGRLKVTLHHNIFDGVLQRLPRVRFGQVDVYNNHYRLGGDDFEYALGVGVQSAIYAQNN
FFTLDAAVDPADLLYDWGGTALTERGSWVRQGAGPARPVDLLAAYNAAHDPDLGADAGWT
PTLRRDPVLPTPLVPLLVGPLAGADRLPL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaacactcaccgtcgcgacccttgtcgcccttctgctcggtgccgcaccggcc
atggccgccggccgtcccgactccgtcgaccgtctctcctgggcagcccgtcagctcggg
cggcaggcacttcccgagcgggacggctgggcggccgagggcgccggcaccacaggcggc
tcgaccgcggcacccgaacgcaccagggtggtccgcgaccgggccgaactggtcgccgcg
cttggcggcgacaacgccagcaacgccaccgacgccacaccgaagttgatctacgtggac
ggcgtcgtcgacggcttcgaaggacccgacggcacgccgttgagctgcgccgacctggcc
gacccggggtaccggctggacgcctacctggtcgcgtacgacccggcggtgtggggtcgg
gtgacgccggccgggccgctggaggaggcccgggtgcgctcggttgccaaccagacccgg
cagacccagatcaacgtcggcccgaacaccacgatcatcgggctgcgtggtgcccggctg
accggtctcaccctgatgatcgaccgggcgtcgaacgtgatcgtgcgcaacctgaccttc
gtcgacgcccgggactgcttccccgcctggtcaccgaccgacggcgacaccggcaactgg
aacagccagtacgaccagatctcggtgcgccgcagcgagcacgtgtggatcgaccacaac
acgttcaccgacggcgacaatccggacagcgcgcagccgacctacttcgggcggccgtac
caggtgcacgacggctcgctggacgtcacgcacaccgcgagcctcgtcaccgcgtcctgg
aaccgcttcaccgggcgcgacaagctgatgctgatcggctcgtcgaacactgtcggcccg
gacgtgggccggttgaaggtgaccctgcaccacaacatcttcgacggcgtcctgcaacgg
ctgccccgtgtgcggttcggccaggtcgacgtctacaacaaccactaccggctcggtggg
gacgacttcgagtacgcgctcggcgtcggcgtccagtcggcgatctacgcgcagaacaac
ttcttcaccctcgacgcggcggtcgacccggccgatctgctctacgactggggaggtacc
gcgctcaccgagcggggcagctgggtccgccagggcgcgggtccggcccggccggtcgac
ctgctggcggcgtacaacgcggcgcacgatccggacctgggcgccgacgccgggtggacg
cccacgctgcgccgcgaccccgtcctgccgacgccactggtcccgctcctggtgggcccg
ctggcaggcgccgatcggctaccgctgtga
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