Micromonospora profundi: Q3V37_27010
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Entry
Q3V37_27010 CDS
T09358
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mprn
Micromonospora profundi
Pathway
mprn03030
DNA replication
mprn03430
Mismatch repair
mprn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mprn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q3V37_27010 (dnaE)
03430 Mismatch repair
Q3V37_27010 (dnaE)
03440 Homologous recombination
Q3V37_27010 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mprn03032
]
Q3V37_27010 (dnaE)
03400 DNA repair and recombination proteins [BR:
mprn03400
]
Q3V37_27010 (dnaE)
Enzymes [BR:
mprn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q3V37_27010 (dnaE)
DNA replication proteins [BR:
mprn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q3V37_27010 (dnaE)
DNA repair and recombination proteins [BR:
mprn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q3V37_27010 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WLS44981
UniProt:
A0AAJ6L2I9
LinkDB
All DBs
Position
complement(6025940..6029470)
Genome browser
AA seq
1176 aa
AA seq
DB search
MADSFAHLHVHTEYSMLDGAARLKDLFAEAKRLGMPAVAITDHGNMHGANDFYNQAMAAG
ITPILGVEAYVAPESRYHKARVKWGRPEQKSDDISGNGAITHKTMWAKNAQGLKNLFTLN
SRASMEGHYVKWPRMDMELIAEHADGIMATTGCPSGAVQTRLRLGQFDEALKVAASYQDI
FGKDNYFLEIMDHGLSIERRVREGLTEIARKLDIPPVVTNDSHYTHEAQATAHDVLLCVQ
TGSNIDDPNRFRFEGGGYFIKSADQMRAVDSSELWQEGCRNTLLVAEKVDPKGMFEFHNL
MPRFPVPEGETEESWFRKETFAGLARRYPNGIPEGHVVQAEYELGVINQMGFPSYFLVVA
DFIQWAKSQGISVGPGRGSAAGSLVAYALGITDLDPIQHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGFPYAVGDRITKAMPP
AVMGKDIPLTGIFDPKHPRYAEAGEIRGLYDSDPDVRKVIDTAKGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDADGAIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIELN
HGTKLDLLGLPLDDKAAYDLLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLREILAPTHGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFIPFRDGCRERGYSDEAIQAVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAGLLTSVGDDKDKMALYLSECRRMRIQVLPPDVNTSA
GPFTPVGKDIRFGLAAVRNVGANVVASIMRCRQEKGDYTDFYDFLSKVDAVVCNKKTIES
LIKAGAFDSMQHPRKGLLAVHADAIDAYADVKRKEAVGQYDLFGAGFGDADTGSTTVMPV
IGDSEWDKRDKLAFEREMLGLYVSDHPLFGLEHILNAAADTTIASLAEDGAVPDGAVVTL
AGILSGVQRRVTKQGRAWASATLEDLAGGVETLFFPNTYEVVGQYIAEDAIVVVKGRVDR
RDDTPRIMAMDMSMPDVSTSATNKPVTLTIPVHRCTPPLVERLKETLVLHPGDTEVHVKL
LNGGRTTTLRLGPFRVAATTALMGDLKSVLGPANVT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcgttcgcgcatctgcacgtgcacaccgagtactcgatgctcgacggagcg
gcccggttgaaggacctgttcgccgaggccaagcggctcggcatgccggcggtggcgatc
accgaccacggcaacatgcacggcgcgaacgacttctacaaccaggcgatggccgccggg
atcaccccgatcctgggcgtcgaggcgtacgtggcgccggagtcgcgctaccacaaggcg
cgggtcaagtggggtcggccggagcagaagagcgacgacatctccggtaacggcgccatc
acccacaagaccatgtgggcgaagaacgcgcagggtttgaagaacctgttcaccctcaac
tcgcgcgcgtccatggaggggcactacgtcaagtggccccggatggacatggagctgatc
gccgagcacgccgacggcatcatggccacgaccggctgcccgtcgggggcggtgcagacc
cggctgcggctgggccagttcgacgaggcgctcaaggtggccgcgagctaccaggacatc
ttcggtaaggacaactacttcctggagatcatggaccacggcctctccatcgagcgccgg
gtccgcgaagggctcaccgagatcgcccgcaagctggacatcccgccggtggtcaccaac
gactcgcactacacgcacgaggcacaggccaccgcccacgacgtgctgctctgcgtgcag
accggcagcaacatcgacgacccgaaccggttccggttcgaaggtggcggctacttcatc
aagagcgccgaccagatgcgcgcggtggactcgtcggagctgtggcaggagggttgccgc
aacaccctgctggtggccgagaaggtcgacccgaagggcatgttcgagttccacaacctg
atgccacgcttcccggtgcccgagggggagaccgaggagtcctggttccgcaaggagacc
ttcgccgggctggcccgccgctacccgaacggcatccccgagggccacgtcgtccaggcc
gagtacgagctgggcgtcatcaaccagatgggcttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtgggccaagagccagggcatctcggtgggtccgggccgtggttcggcc
gccggctcgctcgtcgcgtacgcgttgggcatcaccgacctggacccgatccagcatggc
ctgatcttcgagcggttcctcaaccccgagcgtgtctcgatgccggatgtcgacatcgac
ttcgacgagcgtcggcgcggtgaggtgatcaagtacgtcaccgacaagtggggtgaggac
aaggtcgcccagatcgcgaccttcggcacgatcaaggcgaaggccgcgatcaaggactcg
gcccgggtcctcggtttcccgtacgcggtcggcgaccggatcaccaaggcgatgccgcca
gccgtgatgggcaaggacatcccgctcaccggcatcttcgacccgaagcacccccgctat
gccgaggccggcgagatccgcggcctgtacgactcggacccggacgtccgcaaggtgatc
gacacggcgaagggcatcgaggggctgatccgccagacaggtgtgcacgccgcgggcgtc
atcatgtccgccgagccgatcatcgagcacatcccgttgatgcgtcgtgacgccgacggg
gcgatcatcacgcagttcgactatccgacgtgcgagtcgctcgggctgttgaagatggac
ttcctcggtctgcgcaacctgacgatcatcgacgacgccgtcaagaacatcgagctcaac
cacggtacgaagctcgacctgctgggcctgccgcttgacgacaaggccgcgtacgacctg
ctggcccgtggtgacaccctcggcgtgttccagctcgacggcgggccgatgcggtcactg
ctgcggctgatgaagcctgacaacttcgaggacatctccgccgtcctggccctgtaccga
ccgggcccgatgggcgtcgactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggagctggaggagccgctacgggagatcctggcgcccacc
cacggcctgatcgtctaccaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
accctcggccaggcggacctgctgcgccgggccatgggtaagaagaagaaggagatcctc
gacaaggagttcatcccgttccgggacggctgccgcgaacgcggctactccgacgaggcg
atccaggcggtgtgggacgtcctggtgccgttcgccgggtacgccttcaacaaggcgcac
tccgccgcgtacgggctggtgtcctactggacggcgtacctgaaggcgcactacccggcc
gagtacatggccgggctgctcacctccgtgggcgacgacaaggacaagatggcgctctat
ctgtccgagtgtcgccggatgcggatccaggtgctcccgcctgacgtgaacacctcggcc
ggaccgttcaccccggtcggcaaggacatccggttcggcctggcggcggtgcgcaatgtc
ggcgcgaacgtcgtcgcctcgatcatgcggtgccgccaggagaagggcgactacaccgac
ttctacgacttcctgtccaaggtggacgcggtggtctgcaacaagaagacaatcgaatcg
ctgatcaaggctggcgcgttcgactcgatgcagcacccgcgcaagggcctgctcgcggtg
cacgccgacgctatcgacgcgtacgccgatgtcaagcgcaaggaggcggtcggccagtac
gacctcttcggtgccggcttcggtgacgccgacacgggcagcacgacggtgatgccggtg
atcggcgacagtgagtgggacaaacgcgacaagcttgccttcgagcgcgaaatgctcggc
ctgtacgtctccgaccacccgctgttcggcctggagcacatcctcaacgcggcggccgac
accacgatcgcgtccctggccgaggacggcgctgtgcccgacggggcggtggtcacactc
gccggcatcctctccggtgtgcagcgtcgggtcaccaagcagggccgcgcctgggcctcg
gcgacactggaggatctggccggtggggtggagacgctgttcttccccaacacctacgag
gtggtaggacagtacatcgccgaggacgccatcgtcgtggtcaagggtcgggtggaccgc
cgcgacgacactccacgaatcatggcgatggacatgtccatgccggacgtcagcaccagc
gccaccaacaagcccgtcaccctcaccatcccggtgcacaggtgcacgccgccgctcgtg
gaacgactcaaggaaacccttgtgctgcaccctggcgacaccgaggtgcacgtcaagctt
ctcaacggcggtcggaccaccaccctgcggctgggtccgttccgggtggcggcgacgacc
gcgctgatgggtgacctgaagagcgtcctcggcccggccaacgtgacctga
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