Moorena producens: BJP34_06405
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Entry
BJP34_06405 CDS
T04499
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpro
Moorena producens
Pathway
mpro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJP34_06405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpro03019
]
BJP34_06405
03400 DNA repair and recombination proteins [BR:
mpro03400
]
BJP34_06405
Enzymes [BR:
mpro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP34_06405
Messenger RNA biogenesis [BR:
mpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BJP34_06405
DNA repair and recombination proteins [BR:
mpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJP34_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
TnsD
Helicase_Sgs1
HTH_11
TadB_TadC_N
Motif
Other DBs
NCBI-ProteinID:
AOW99130
UniProt:
A0A1D8TNA4
LinkDB
All DBs
Position
complement(1673028..1675157)
Genome browser
AA seq
709 aa
AA seq
DB search
MEQSPSLEHALKHFFGHDCFRPGQRQIIEEALQNQDLLIIMPTGGGKSLCYQLPALLKPG
LTVVVSPLISLMQDQVTSLEDNGIGATFINSTLSFQQMRSREAAILQGQIKLLYVSPERL
LAEQFIPFLDRVRSQIGIPTFAIDEAHCVSQWGHDFRPEYRQLKLLRNRYPNSSVLALTA
TATNRVQQDIIQQLELRQPKVHIASFNRPNLYYDVQPKQRQSYKQLLKQIRSHQGSGIVY
CTSRRSVDEVAFRLQNDGISALPYHGGMTDKARTTNQNRFIRDDVRIIVATVAFGMGINK
PDVRFVIHYDLPRNLESYYQESGRAGRDGEPATCTVLFSASDISKLHYLIDQKPDPNEQR
IAYQQLNQIVDYAEGTDCRRRILLGYFGERFPGNCDKCDNCCYPKPVEDWTIEAQKFLSC
VARCRERFGMNHIIQVLRGSKSKKIEQYGHHLLSTYGIGKDRTAEAWKILVRSLLHQGLV
DQTTDGYSVLKLNKLSWEILRKQRSVYVAIPQSSVEKALGEINPRAAEAELLLDKLRKLR
KQLADRQSIPPYVVFADSTLKLMAQLKPKTLEHFAKLSGVTQYKVTQYGEQFVSEIRAFC
QEQKLPEPLPSSTYMKTLQFYQQGLSVEEIAKQRGYTTRTIIDHLSQLIEMNQPVDLKRL
VPLEHHEPIIKAIEKVGDQYLRKLREYLGERYSYEDIQLVRAWWRRQDN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtcgccatccctggagcatgcccttaaacatttctttggtcacgactgtttc
cgtccaggacagcgacagattattgaagaggcgcttcaaaatcaggatttactgattatc
atgcccactgggggtggtaaatccttgtgctatcaactgccagctctcctcaaaccgggc
ttaaccgttgtggtatctcctctgatttccttgatgcaagaccaagtgacgtctttggaa
gataatggcattggggctacctttatcaatagtaccttgagcttccaacaaatgcgatcg
cgggaagcggccatccttcagggtcagataaaattactctacgtatcaccagaacggtta
ctagcagagcagtttatcccatttttggatagagtgcgatcgcaaatcggtattcccacc
tttgccattgatgaagcgcactgcgtctcacaatgggggcatgattttcgcccagaatat
cggcaactaaaactattacgtaaccgctatcctaatagctcagtgctggctctgaccgct
actgctactaatcgagtccaacaggacattatccaacaactggaactgcgacagccgaag
gttcacatcgccagtttcaaccgtcctaacctttactacgacgttcaaccaaaacaacgg
caaagctataaacagttattaaaacagatccgttctcaccaaggttccggtattgtgtac
tgtacgagccgccgttctgtagacgaagttgctttccggttacagaatgatggcatttct
gccttaccttaccatggcggaatgacggataaagctaggacaactaatcaaaatcggttt
attcgggatgatgtgcggataatcgtagctacggtagcctttggcatgggaattaataag
cccgatgtacggtttgtgattcactacgatttacctcgtaacctggaaagttattaccag
gaatcgggacgagcaggacgggatggggaaccagccacatgtaccgttttattcagcgct
agtgatatctcaaaacttcattatctcattgatcaaaagcccgatcccaacgaacaacgg
attgcctatcaacagttaaatcagattgttgactacgcagaaggcacagattgtcgccgc
cggattttgctggggtactttggtgagcggtttccagggaattgtgacaaatgtgataac
tgttgctatcctaagccagtagaagattggacaattgaagctcaaaaattcctctcttgt
gtagcccggtgtcgggaacggtttgggatgaaccacattattcaagtgttgcggggctca
aaaagtaagaaaattgagcaatatggccatcacttactctctacttatggtattggtaag
gatagaactgcagaggcttggaaaattctagtgcgatcgcttttgcaccagggattagta
gaccaaaccaccgatggctactctgtgctgaagctcaataaactaagttgggaaatcctg
cgcaaacaacgttctgtttatgttgctattccccagtcatctgtagaaaaagccttaggg
gaaattaaccccagagcagctgaagcggagcttctgctagataaactgcggaaactaagg
aaacagctagctgaccgccaatcgattccgccctatgtagtgtttgctgattcgacactg
aaactgatggcacagctgaaacccaaaactttagagcattttgctaaactttctggtgtc
actcagtataaagttactcagtatggcgagcaatttgtttcagaaattagggcattttgt
caagagcaaaaactaccagaacctctgccctccagtacctatatgaaaaccctgcaattc
tatcaacaagggttaagtgtagaggaaattgctaaacaacgagggtatactaccaggact
ataatagatcatttgagccaattaattgaaatgaatcagccagtggatttaaaacgactg
gtaccattggaacaccatgagccaattatcaaagcaattgaaaaagtgggtgatcagtat
ctgagaaaattacgggaatacttaggagaacgttactcctacgaagacattcaactagtc
cgtgcttggtggcgacggcaggataattga
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