Microbacterium protaetiae: ET475_09655
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Entry
ET475_09655 CDS
T06575
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mprt
Microbacterium protaetiae
Pathway
mprt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mprt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ET475_09655 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mprt03021
]
ET475_09655 (rpoC)
03400 DNA repair and recombination proteins [BR:
mprt03400
]
ET475_09655 (rpoC)
Enzymes [BR:
mprt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ET475_09655 (rpoC)
Transcription machinery [BR:
mprt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ET475_09655 (rpoC)
DNA repair and recombination proteins [BR:
mprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ET475_09655 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
YlqD
Motif
Other DBs
NCBI-ProteinID:
QAY60227
UniProt:
A0A4P6EJ79
LinkDB
All DBs
Position
2083968..2087843
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDATTFDELRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEEARHRDLPTHENNLRLEMKTIADRRDARVAARLQKLEED
LAALEAEGAKADQKKKTKDAAEKEMASVRKNADEQIARLERVWEDFRTLEVGALKPEDDV
FHELQDRFGQYFEAYMGAESIQRRLQAFDLAAESESLRLQISEGKGQRKIRAIKRLKVVN
SFLSTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPTLKLHQCGLPKTMAIELFKPFVIKRLIDLGHSQNIKAAKRAVERMR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHYLTTLKEGAAGEGR
VFGSVGEAILARDEGTLDLQAKVRIRIPGLAFLEGESPEGYETHGLVDTSLGQAIFNDAL
PKGYPFVREQADKGKLSQIVNKLAEEYPKVTVAAALDAIKDAGFYWATRSGVTVAMSDIL
TPPSKAAIIGEHEKRAAKVQSQYEKGLTTDAERRQELIKIWTEATDEVQKAMRDNFPAEN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTSKGLELPIAAAGADGTLVRDANVE
NSVFSRTLATDVVSESGEVLAEAGSDVGDVLINRLIELGVTSIKVRSVLTCDSAVGVCAQ
CYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVTELF
EARTPKGASPIAESDGRVTIDETEKTRKVILTPDNGDEPHVYPVLKRATLLVEDGQHVTV
GQPLQVGTLDPKEIMRVQGAREVQKYLVNGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGETTLLPGELVDSRRFIDRNRASVAEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLTKYRNVVVEATEEAKSERYPNRI
FASDGAYSDADLSYVDFDSFSTDDYTPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgcaacaactttcgatgagcttcgcatcggcctggccaccgccgacgacatc
cgtcgttggtcctacggtgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
cccgagaaggacggtctgttcggcgagcagatcttcgggcccagccgcgactgggagtgc
gcctgcggtaagtacaagcgtgtccgcttcaagggcatcgtctgcgagcgctgcggcgtg
gaggtcaccaagagctccgtccgccgcgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgtcccctcgcgcctggggtacctgctggacatg
gcccccaaggacctcgagaaggtcatctacttcgccgcctacatggtcatctcggtcgat
gaggaggcgcgtcaccgcgaccttcccacgcacgagaacaacctgcgcctggagatgaag
accatcgccgaccggcgcgacgcgcgcgtggccgcccgcctccagaagctggaggaggac
ctcgccgccctcgaggccgaaggcgccaaggccgaccagaaaaagaagacgaaggacgcc
gccgagaaggagatggcgtcggttcgcaagaacgccgacgagcagatcgcccgtctcgag
cgcgtctgggaggacttccgcaccctcgaggtgggcgccctcaagcctgaggacgacgtc
ttccacgagctgcaggaccgcttcggccagtacttcgaggcctacatgggcgccgagtcg
atccagcgccgcctgcaggcgttcgacctggccgccgagtcggagagcctgcgcctgcag
atctccgagggcaagggccagcgcaagatccgtgcgatcaagcgtctgaaggtcgtcaac
tcgttcctgtcgaccgggatgagccccgcctcgatggttctcgacgtcgttccggtgatc
ccgcccgagctgcgccccatggtgcagctcgacggtggccgcttcgcgacatccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgccttcgtcgcctgatcgatctc
ggtgctcccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgtcgcggccgcccggtcaccggtaccggcaaccgtgcgctcaag
tcgctctctgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtggactactcgggtcgttcggtgatcatcgtcggcccgacgctgaagctgcaccag
tgtggtctgcccaagacgatggcgatcgagctgttcaagccgttcgtgatcaagcgcctg
atcgacctgggtcactcgcagaacatcaaggccgccaagcgcgccgtcgagcgcatgcgt
cccgaggtctgggacgtgctcgaggagatcatccgcgagcgccccgtgctgctcaaccgc
gcccccacgctgcaccgtctgggcatccaggcgttcgagccccagctcgtggagggcaag
gccatccagctgcacccgctcgtgtgtgcggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggtcgaggctcaggccgaggctcgcatcctcatgctg
gcctcgaacaacatcctcaagccgtcggacggccgcccggtgaccctgccctcgcaggac
atgatcatcggtctgcactacctgaccacgctcaaggagggcgcggccggcgaaggccgg
gtgttcggttcggttggcgaggccatcctcgcccgcgacgaaggcacgctcgacctgcag
gcgaaggtacgcatccgcattccgggtctggccttcctcgagggcgaatcgcccgagggg
tacgagacccacggcctggtggacacctcgctgggtcaggcgatcttcaacgacgcgctg
cccaagggctacccgttcgtgcgcgagcaggcggacaagggcaagctcagccagatcgtg
aacaagctggccgaggagtacccgaaggtcaccgtggccgccgccctcgacgcgatcaag
gacgccggcttctactgggccacccggtcgggcgtgaccgtcgcaatgagcgacatcctc
accccgccgagcaaggccgcgatcatcggtgagcacgagaagcgcgccgccaaggtgcag
agccagtacgagaagggtctgaccaccgacgccgagcgccggcaggagctcatcaagatc
tggaccgaggccaccgacgaggtgcagaaggcgatgcgggacaacttcccggccgagaac
accatcaaccgcatggtgtcgtcgggcgcccgtggtaactggctgcagatccgcaacatc
gcgggtatgcgcggcctggtgaacaaccccaagggtgagatcatcccgcgcccgatcatc
tcctcgtaccgcgaggggctgagtgtggccgagtacttcatcgccacgcacggtgcccgc
aagggtctggccgacaccgctctgcgcaccgccgactcgggctacctgacccgtcgcctc
gttgatgtgtcgcaggacgtcatcatccgtgaggacgactgcggcaccagcaagggtctc
gaactgccgatcgcggcagccggtgccgacggcacgctcgtgcgcgacgcgaacgtcgag
aactcggtgttctcgcgcacgcttgccaccgatgtcgtctcggagtcgggtgaggtgctc
gccgaggcgggctctgatgtcggcgacgtgctgatcaaccgcctgatcgagctgggtgtg
accagcatcaaggtgcgctcggtgctcacctgtgattcggctgtcggtgtctgcgcgcag
tgctacggccgttcgcttgccacgggcaagctcgtcgacatcggcgaggcggtgggcatc
atcgccgcccagtcgatcggcgagcccggcacgcagctgaccatgcgcaccttccacacg
ggtggttcggcgtcggctgacgacatcacccagggtctgccgcgtgtcaccgagctgttc
gaggcgcgcacgcccaagggtgcgtcgccgatcgccgagtcggacggccgcgtcacgatc
gacgagaccgagaagacccgcaaggtcatcctgacccccgacaacggcgacgagccgcac
gtctacccggtcctcaagcgtgcgaccctgctcgtggaggacggccagcacgtgacggtc
ggccagccgctgcaggtgggcacgctcgacccgaaggagatcatgcgcgtgcagggcgcc
cgcgaggtgcagaagtacctcgtcaacggcgttcagggcgtgtaccgctcccagggtgtg
ccgatccacgacaagcacatcgaggtcatcgttcgccagatgctgcgcaaggtcaccgtc
gtcgaccacggcgagaccacgctgcttccgggtgagcttgtcgactcgcgtcgcttcatc
gaccgcaaccgtgcgtcggtggccgagggcaagcgccccgcgtcgggtcgtcccgagctg
atgggtatcaccaaggcgtcgcttgcgaccgagtcgtggctgtcggccgcgtcgttccag
gagacgacgcgcgtgctgacccaggccgcgatggagggcaagagcgacccgctcgtgggc
ctgaaggagaacgtgatcatcggaaagctgatccccgccggcaccggactcaccaagtac
cggaacgtcgtggtggaggcgaccgaagaggcaaagagcgagcggtaccccaaccgcatc
ttcgcctcggacggcgcctacagtgacgccgacctgagctacgtcgacttcgacagcttc
tcgaccgacgactacaccccgggtacgtacaactga
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