Microbacterium protaetiae: ET475_16645
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Entry
ET475_16645 CDS
T06575
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mprt
Microbacterium protaetiae
Pathway
mprt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mprt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ET475_16645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mprt03019
]
ET475_16645
03009 Ribosome biogenesis [BR:
mprt03009
]
ET475_16645
Enzymes [BR:
mprt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ET475_16645
Messenger RNA biogenesis [BR:
mprt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ET475_16645
Ribosome biogenesis [BR:
mprt03009
]
Prokaryotic type
rRNA processing factors
ET475_16645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
QAY61934
UniProt:
A0A4P6EHQ3
LinkDB
All DBs
Position
complement(3568331..3570685)
Genome browser
AA seq
784 aa
AA seq
DB search
MAEAPAAASVVPVEQEQAEEGAPAEAESSVEPAEAAEPPSISEPGSVAPEPVAEPENIAE
PEVPVEPEAVAEPEAAAAPEVAAAPEVAAEPEVAAEPEAAAEPEAPAEPETPTAVSLGLL
PEEFVSAVSTDLHFYAPEIAPLPPLPDAPAPQEGGSPRRRNRRRGEGRDDEQQQQPRERV
VEVITEPQRIKGSTRLEAKKQRRRDGREAGRRRPVVTEAEFLARRESVDREMIVRSKNGR
IQIGVLEDKILAEHYVARSQDASLIGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYSGEV
DWDGVETGNQPRRIELALKTGDRVLVQVTKDPVGHKGARLTSQISLPGRYLVYVPGGAMN
GISRKLPDTERARLKRILKEVLPESSGVIVRTAAEGATEDQLTRDVQRLTAQWEHINRLV
ETQQAPALLHSEPDLLVKIVRDVFNEDFSKMLIQGEDAQHTIENYLQAVAPDLLERVERF
EGDGDPFDEFRITEQIEKALDRKVWLPSGGSLVIDRTEAMTVIDVNTGKFVGTGGNLEET
VTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRLVECLSRDRTKHQVAE
VTSLGLVQMTRKKIGLGLVETFSEPCEVCAGRGIIVHHDPVVKHRGSSSAGSNNSRRSRP
APVPTTTPAGGTHVITEGAKSALAKIAASTLHPADGEEQVVAEAAEPAPAVTEPERPKKR
KKRKEKEAKSSHEPKTERDLLLDSVLNALPEPKAPGQGRSRRRVTTAALTGTPISTTPEV
ASED
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atcgctgaggcaccggccgcggcatccgttgttccggtggagcaggagcaggctgaagaa
ggtgcacccgccgaggcggagtcgtcggtggagccggccgaggccgctgagccgccgtcg
atttctgagcccgggtcggtggcgccggaacccgttgccgagccagaaaacatcgctgag
ccggaggttcctgtcgagcccgaggctgtggccgagcccgaggctgccgccgcgcctgag
gttgccgccgcgcctgaggttgccgccgagcccgaggttgctgccgagccggaggctgcc
gcagagccggaggctcccgccgagcccgaaacgcctaccgcggtgagcctggggctgctg
cccgaagagttcgtgtcggcggtatcgaccgacctgcacttctatgctcccgagatcgcg
ccgttgccgccgctgcccgatgctcccgcgccgcaggaaggcgggtcgccgcgccggcgc
aaccgtcgccgcggcgaggggcgcgacgacgagcagcagcagcagccgcgcgagcgcgtg
gtcgaggtcatcaccgagccgcagcgcatcaagggatcgacccggctcgaggcgaagaag
cagcgccgtcgcgatggtcgtgaggcagggcggcgtcgcccggtggtcaccgaggccgag
ttcctcgcccgccgcgagtccgtcgaccgcgagatgatcgtgcgctcgaagaacggacgc
atccagatcggagtgctcgaagacaagatccttgccgagcactacgtcgcccgcagccaa
gacgcctcgctcatcggcaacgtgtacctcggtcgtgtgcagaacgtgctgcccagcatg
gaggcggccttcgtcgacatcgggcgcggccgcaacgccgtgctgtattcgggcgaggtg
gactgggacggcgttgagaccggcaaccagccgcgccgcatcgagctggcgctcaagacc
ggcgaccgggtgctcgtgcaggtcacgaaggaccccgtcggtcacaagggcgcgcgcctg
accagccagatctcgctgcccggccgttacctcgtgtacgtgcccgggggagccatgaac
ggcatctcgcgcaagctccccgacaccgagcgtgccaggctcaagcgcatcctcaaagag
gtgctgcccgagtcatccggtgtcatcgtgcgcaccgctgccgaaggcgccaccgaagac
cagctcacgcgtgacgtgcagcggctcaccgcgcagtgggagcacatcaaccgcctcgtc
gagacccagcaggcaccggccctgttgcactccgagcccgatcttctcgtcaagatcgtt
cgcgacgtcttcaacgaagacttctcgaagatgctcatccagggcgaagacgctcagcac
accatcgagaactacctgcaggcggtcgcccccgatctgctcgaacgtgtcgagcgcttc
gagggcgatggcgatccgttcgacgaattccgcatcaccgaacagatcgagaaggcgctc
gaccgcaaggtctggctgccctcgggcggctcgctggtcatcgaccgcaccgaggcgatg
acggtgatcgacgtgaacaccggaaagttcgtcggcacgggcggcaacctcgaagagacc
gtcacgaagaacaaccttgaggccgccgaagagatcgtccgtcagctgcgtctacgtgac
atcggcggcatcatcgtggtcgacttcatcgacatggtgctcgagtccaaccgcgacctc
gtgctccggcggcttgtggagtgcttgagccgtgaccgcacgaagcatcaggtggctgag
gtcacctcgctgggcctcgtgcagatgacgcggaagaagatcggcctcggccttgtcgag
accttcagcgagccgtgcgaggtctgcgccggccgcggaatcatcgtgcaccacgacccg
gtcgtcaagcaccgcggttccagcagcgccggcagcaacaactcccgccgctcgcggccc
gcgccggtgcccaccacgaccccggccggtggcacccacgtgatcaccgagggggccaag
tcggcgctcgcgaagatcgcggcgtccactttgcacccggcggacggcgaggagcaggtc
gtggccgaagccgcggagccggctccggcggtgaccgagccggaacggccgaagaagcgc
aagaagcgcaaggagaaggaagcgaagtcgtcgcacgagccgaagaccgagcgtgacctg
ctgctggactctgtgctcaatgcgctgcccgagcccaaggcacccggtcaggggcgttcg
cgccggcgcgtgaccacggccgcgctgaccggcacgccgatctcgacgacgcccgaggtg
gcgagcgaggactga
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