Microbacterium protaetiae: ET475_16930
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Entry
ET475_16930 CDS
T06575
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mprt
Microbacterium protaetiae
Pathway
mprt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mprt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ET475_16930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mprt03019
]
ET475_16930
03009 Ribosome biogenesis [BR:
mprt03009
]
ET475_16930
Enzymes [BR:
mprt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ET475_16930
Messenger RNA biogenesis [BR:
mprt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ET475_16930
Ribosome biogenesis [BR:
mprt03009
]
Prokaryotic type
rRNA helicases
ET475_16930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
HEM4
Cas3-like_C_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QAY61478
UniProt:
A0A4P6ETW4
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All DBs
Position
3623264..3625051
Genome browser
AA seq
595 aa
AA seq
DB search
MTDTMDAADSGATETAEATPEEQQAPGFADLGVTGPVLAAVHDLGYETPSAIQAATIPLL
LEGRDVLGTAQTGTGKTAAFALPVLERLDLSQKTPQALVLAPTRELALQVCEAFESYAGR
MKGVHVLPVYGGQAYGVQLSALRRGVHIVVGTPGRIMDHQAKGTLDLSELKYLVLDEADE
MLKMGFAEDVEQILAQTPADKQVALFSATMPAAIRRLAQKYLRDPEEVAIKTKTTTNQNI
TQRYLVVSYAQKVDALTRILEVENFDGVIVFVRTKNETETLAEKLRARGYSAAAISGDVA
QAQRERSVNQLKAGKLDILVATDVAARGLDVERISHVINFDIPTDTESYVHRIGRTGRAG
RSGDAISFITPRERYLLGHIEKATRQKPAQMKLPTTDDVNTTRLARFDDAITAALEATGR
IEAFRDIIDHYVRHHDVPESDVAAALAIVAQGETPLLLDPENDPLAVSVDAVNRPQKDRG
ARAERGTREPRRGRGDYAPYRIEVGRRHRVEPRQIVGALANEGGLRRDDFGVITIKPDFS
IVELPATLDPGVLDKLSGTRISGRLIQMKPDRGAPHRRRPDDGDDRPPRKPRHKV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacaatggatgccgccgacagcggcgcgaccgagacggcagaggccacaccc
gaagagcaacaggcaccgggtttcgccgatctcggcgtcacgggcccggtgctggccgcc
gtgcacgatctgggctacgagacgccgtcggcgattcaggcggccacgattccgctgctt
ctcgagggccgcgatgtgctgggcactgcgcagaccggaacgggcaagaccgcggccttc
gctctccccgtactcgagcggctcgacctgtcgcagaagacaccgcaggccctcgtgctc
gccccgacccgcgagctggctctgcaggtgtgtgaggcgttcgagtcgtatgccggtcgc
atgaagggcgtgcacgtgcttcccgtctacggcgggcaggcctatggcgtgcagttgtcg
gcgctgcgccgtggcgtgcacatcgtcgtgggaacgcccggccgcatcatggaccaccag
gccaaaggcacgctcgatctgtccgagctgaagtacctggtgctcgatgaggccgacgag
atgctcaagatgggcttcgccgaagacgtcgagcagattctcgcgcagacgcccgccgac
aagcaggtcgccctgttctcggccacgatgcctgccgcgatccgccgtctcgcccagaag
tacctgcgcgaccccgaagaggtcgcgatcaagacgaagaccacgaccaaccagaacatc
acgcagcggtacctcgtcgtctcgtacgcgcagaaggtggatgccctcacccgcattctc
gaagtcgagaatttcgacggggtcatcgtcttcgtgcgcacgaagaacgagaccgagact
ctcgccgaaaagctgcgcgcccgcggatactcggctgccgccatcagcggcgacgtggcc
caagcgcagcgcgagcgctcggtgaaccagctcaaggccggcaagctcgacattctggtc
gcgaccgacgtcgccgcacgcggtctggatgtcgagcgcatcagccatgtgatcaacttc
gacatccccaccgacaccgagtcatatgtgcaccgcatcgggcgcaccggacgcgcgggc
cgctcgggcgatgcgataagtttcatcaccccgcgcgagcgatatctgctggggcacatc
gagaaggccacgcgccagaagcccgcccagatgaagctgccgaccaccgacgacgtcaac
acgacccgtctcgcacgcttcgatgacgccatcaccgcggcactggaggcgaccgggcgc
atcgaggcgttccgcgacatcatcgaccactatgtgcgccaccacgatgttcccgaatcg
gatgtcgcagccgcactcgcgatcgtcgcgcaaggtgagacgcctctccttctggatccc
gagaacgacccgctggcggtatcggtcgacgccgtgaaccggccgcagaaggatcgcggt
gcccgcgccgaacggggtacgcgggaaccgcgacgcggccgcggggattatgccccgtac
cgcatcgaggtcggccgacggcaccgtgtcgagccccgccagatcgtgggcgcgctggcc
aacgagggcggcctgcgccgcgacgacttcggcgtcatcacgatcaaacccgacttctcg
atcgttgagcttcccgcaaccctcgacccgggcgtgctcgacaagctcagcggcacccgc
atctcaggccgtctcatccagatgaagcctgaccgcggggcgccgcaccggcgccggccc
gacgacggcgacgaccgcccgccgcgcaagccgcgccacaaggtctga
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