KEGG   Metallosphaera prunae: DFR88_05560
Entry
DFR88_05560       CDS       T05966                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mpru  Metallosphaera prunae
Pathway
mpru03030  DNA replication
mpru03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mpru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DFR88_05560
   03410 Base excision repair
    DFR88_05560
   03450 Non-homologous end-joining
    DFR88_05560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpru03032]
    DFR88_05560
   03400 DNA repair and recombination proteins [BR:mpru03400]
    DFR88_05560
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mpru04147]
    DFR88_05560
DNA replication proteins [BR:mpru03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DFR88_05560
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DFR88_05560
DNA repair and recombination proteins [BR:mpru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DFR88_05560
Exosome [BR:mpru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DFR88_05560
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: QCO30029
UniProt: A0A4D8S376
LinkDB
Position
complement(1099312..1100361)
AA seq 349 aa
MGVDLSDLVSEIKRDLNLAEVRGKKVGIDAYNAIYQFLAAIRQYDGTPLMNRQGKVTSHL
NGVFYRTVNLLEEGIIPIYVFDGKPPELKAQELENRRKMKEEAEKKLEKAKESGKVEEMR
KYSQMTSRLTTDMAKESKELLEYMGVPTVQAPSEGEAEAAYLNAKGITYASASQDYDSLL
FGAEKLIRNLTISGKRKLPNKDVYVEVKPELIETASLLKKLEITREQLIDIAILVGTDYN
PDGVRGIGPKKAYKLIKTYKKIENIDKRELPEPIYFDYEKIRELFLKPQVTLPSTPLELS
DPDPSKIIQFLVNENDFNEERVRGTIERLQKAMKEIKDIKRQTGLDQWF
NT seq 1050 nt   +upstreamnt  +downstreamnt
ataggcgtagatctttccgatctggtctcggagataaagagggatcttaacttagctgag
gtcaggggaaagaaggtcggaatagatgcctataacgcaatttaccagtttctcgcagcg
atcaggcagtatgatggaactcctcttatgaatagacaaggcaaggtaactagtcatcta
aatggagtcttttatagaaccgtgaaccttcttgaggaagggatcattccaatttacgtt
ttcgatgggaagcctcctgagttgaaggcccaggaactggagaacaggagaaaaatgaag
gaggaggcagagaagaagctagagaaggccaaggaatcgggaaaggtggaggaaatgagg
aagtactcgcagatgacttccagactgaccaccgatatggcgaaggaaagcaaggaactc
ctggaatacatgggagtccccacagttcaggccccatctgagggtgaagctgaggctgcc
taccttaatgcgaagggaattacgtatgcctccgccagtcaagactatgattctctgctc
ttcggcgcagagaagttgatcagaaacctcaccataagcgggaagaggaaactgcccaac
aaggacgtgtacgtggaggtaaaacctgaactcatcgagacagcttccctcctcaagaag
ctagagataacaagggagcaactgattgacattgcgattctggtgggaacggactacaac
cccgatggagtaaggggcataggccccaagaaagcctataaactgatcaagacctacaaa
aaaattgaaaatatagataaaagggagttacctgagcctatttactttgactacgaaaag
ataagggagttgttccttaaacctcaagtaactcttccgtccacaccacttgagctgagc
gatcccgatcccagcaagataattcagtttctggtgaacgagaacgattttaacgaggaa
agggttaggggaacgatagagaggcttcagaaggctatgaaggagattaaggatataaaa
agacaaacagggttggatcagtggttttaa

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