Metallosphaera prunae: DFR88_06800
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Entry
DFR88_06800 CDS
T05966
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mpru
Metallosphaera prunae
Pathway
mpru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DFR88_06800 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpru03021
]
DFR88_06800 (tfe)
Transcription machinery [BR:
mpru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
DFR88_06800 (tfe)
Prokaryotic type
Archaeal type
TFE
DFR88_06800 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_9
DUF7342
Zn_Ribbon_TF
Zn_ribbon_IS1595
HTH_20
DnaD_N
HTH_Crp_2
Phage_rep_org_N
HypA
TrmB
HTH_11
Rv2175c_wHTH
HTH_IclR
Zn_ribbon_FGT1_2
Zn_ribbon_TFIIB
GntR
HVO_2753_ZBP
HTH_PafC
HTH_Cmi2_C
zf-Mss51
Motif
Other DBs
NCBI-ProteinID:
QCO30236
UniProt:
A0A4D8RZ34
LinkDB
All DBs
Position
complement(1286185..1286715)
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AA seq
176 aa
AA seq
DB search
MTGNIDQLMKDMARDLLGEDVIDVLSFLLDNKTELTDEEMANKLNVKVNEVRKKLYALAE
HGLVSYRRTRDKETGWYVYYWKANVDQINELLLSRKREILNKLKARLEYETNNEFYICPE
DKTKYTFEEAFENEFKCPKCGVQLVYYDSAKMREFLERKIKEIEEEIARETKVGSS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcaacattgatcaactcatgaaagatatggctagggatctcctgggagaggac
gtaatagatgtgctctctttccttcttgataataagacagagctaactgacgaggagatg
gccaacaaactcaacgtcaaggttaacgaggtcaggaagaagttatatgcccttgctgaa
cacgggctggtgagctaccggagaaccagggataaggagactggttggtatgtatattac
tggaaggccaatgtggatcagataaatgaacttctcctctcacgtaagagggagatcctg
aacaaacttaaggctagattggagtacgaaactaacaacgagttctatatttgtcccgag
gataagaccaagtacacctttgaggaggcctttgagaatgagttcaaatgtcccaaatgc
ggtgttcaactggtctattacgattccgccaaaatgcgggaattcctagaacgtaaaata
aaggaaatagaagaggagatcgccagggagacaaaggttgggagctcctaa
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