KEGG   Metallosphaera sedula Ron 12/II: DFR88_07020
Entry
DFR88_07020       CDS       T05966                                 
Name
(GenBank) DNA-binding protein
  KO
K15171  transcription elongation factor SPT4
Organism
mpru  Metallosphaera sedula Ron 12/II
Brite
KEGG Orthology (KO) [BR:mpru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    DFR88_07020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpru03021]
    DFR88_07020
   03019 Messenger RNA biogenesis [BR:mpru03019]
    DFR88_07020
Transcription machinery [BR:mpru03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     DFR88_07020
  RNA polymerase I system
     DFR88_07020
Messenger RNA biogenesis [BR:mpru03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     DFR88_07020
SSDB
Motif
Pfam: Spt4 Zn_ribbon_15 zf-C3HC4_3 DZR DUF7129 DUF6079_6th Zn_ribbon_3
Other DBs
NCBI-ProteinID: QCO30268
UniProt: A0A4D8SF91
LinkDB
Position
1320155..1320352
AA seq 65 aa
MSAKTLKACRSCKALVSKEVQQCPICNGTTFSDEWEGMVILLSEKSELAETIGESKPWRY
AINVK
NT seq 198 nt   +upstreamnt  +downstreamnt
atgtcggccaagaccctcaaggcttgtaggtcgtgcaaggcattggttagcaaagaggtc
cagcaatgtcccatatgcaacggcacaacgtttagtgatgagtgggagggcatggttata
ctcctgagcgagaaatcggagcttgcagagacaataggtgagtctaaaccttggaggtac
gctataaacgtaaagtag

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